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author | eroen <eroen-overlay@occam.eroen.eu> | 2016-11-08 00:05:00 +0100 |
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committer | eroen <eroen-overlay@occam.eroen.eu> | 2016-11-08 00:05:00 +0100 |
commit | b3fd2c3935d037642442bd20501442b29bf1d42b (patch) | |
tree | 4ee95179f87472e9ec24dc2a367dc942c4a10b27 /dev-python | |
parent | awkwardduet - cleanup, bump python versions (diff) | |
download | eroen-b3fd2c3935d037642442bd20501442b29bf1d42b.tar.gz eroen-b3fd2c3935d037642442bd20501442b29bf1d42b.tar.bz2 eroen-b3fd2c3935d037642442bd20501442b29bf1d42b.zip |
rpy-2.8.3 - bumped package from Gentoo
X-Gentoo-Bug: 598970
X-Gentoo-Bug-URL: https://bugs.gentoo.org/show_bug.cgi?id=598970
Diffstat (limited to 'dev-python')
-rw-r--r-- | dev-python/rpy/Manifest | 1 | ||||
-rw-r--r-- | dev-python/rpy/metadata.xml | 14 | ||||
-rw-r--r-- | dev-python/rpy/rpy-2.8.3.ebuild | 69 |
3 files changed, 84 insertions, 0 deletions
diff --git a/dev-python/rpy/Manifest b/dev-python/rpy/Manifest new file mode 100644 index 0000000..11e544c --- /dev/null +++ b/dev-python/rpy/Manifest @@ -0,0 +1 @@ +DIST rpy2-2.8.3.tar.gz 186785 SHA256 24c2ea1c0d7321e6913d5d185efa19f29e920ff8e8afbc5c757f894f61c96873 SHA512 ce6798a1d9301e15b4974f00b4901b535899a7fc0e5d5d751b35875830796d78697987beda6c1f91945d80acaf430019614793b97470ac9a2cc6e72f702874bd WHIRLPOOL f7a772132f353511e8af305a34cfea88c9dc11ae708e528b9bc26d44f3fde0f92f6039acc65a82aabdd4ad2ef40e6021fc9783c04e2d758a859fde6db696da31 diff --git a/dev-python/rpy/metadata.xml b/dev-python/rpy/metadata.xml new file mode 100644 index 0000000..888ad9d --- /dev/null +++ b/dev-python/rpy/metadata.xml @@ -0,0 +1,14 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <longdescription lang="en"> + RPy provides a robust Python interface to the R programming + language. It can manage R objects and can execute arbitrary R + functions. All the errors from the R language are converted to + Python exceptions. + </longdescription> + <upstream> + <remote-id type="pypi">rpy2</remote-id> + <remote-id type="sourceforge">rpy</remote-id> + </upstream> +</pkgmetadata> diff --git a/dev-python/rpy/rpy-2.8.3.ebuild b/dev-python/rpy/rpy-2.8.3.ebuild new file mode 100644 index 0000000..6c7f871 --- /dev/null +++ b/dev-python/rpy/rpy-2.8.3.ebuild @@ -0,0 +1,69 @@ +# Copyright 1999-2016 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=6 + +PYTHON_COMPAT=( python2_7 python3_{4,5} ) +PYTHON_REQ_USE="sqlite" + +inherit distutils-r1 eutils flag-o-matic virtualx + +MYSLOT=2 +MY_PN=${PN}${MYSLOT} +MY_P=${MY_PN}-${PV} + +DESCRIPTION="Python interface to the R Programming Language" +HOMEPAGE="http://rpy.sourceforge.net/ https://pypi.python.org/pypi/rpy2" +SRC_URI="mirror://pypi/${MY_PN:0:1}/${MY_PN}/${MY_P}.tar.gz" + +LICENSE="AGPL-3 GPL-2 LGPL-2.1 MPL-1.1" +SLOT="0" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +IUSE="test" + +RDEPEND=" + >=dev-lang/R-3.2 + dev-python/numpy[${PYTHON_USEDEP}] + >=dev-python/pandas-0.13.1[${PYTHON_USEDEP}] + dev-python/six[${PYTHON_USEDEP}] + virtual/python-singledispatch[${PYTHON_USEDEP}] +" +DEPEND="${RDEPEND} + test? ( >=dev-lang/R-3.2[X,png] ) + dev-python/setuptools[${PYTHON_USEDEP}]" +PDEPEND="dev-python/ipython[${PYTHON_USEDEP}]" + +# ggplot2 is an optional test dep but not in portage +S="${WORKDIR}/${MY_P}" + +# Tarball absent of doc files in doc folder +# https://bitbucket.org/rpy2/rpy2/issues/229 + +python_prepare() { + if ! python_is_python3; then + # https://bitbucket.org/rpy2/rpy2/pull-requests/56 + sed -e '1i# coding=utf-8' \ + -i rpy/rinterface/tests/test_SexpClosure.py \ + -i rpy/rinterface/tests/test_SexpEnvironment.py || die + fi +} + +python_compile() { + if ! python_is_python3; then + local CFLAGS=${CFLAGS} + append-cflags -fno-strict-aliasing + fi + distutils-r1_python_compile +} + +python_test() { + cd "${BUILD_DIR}"/lib || die + virtx ${PYTHON} -m 'rpy2.tests' || die +} + +src_test() { + eshopts_push -u failglob + distutils-r1_src_test + eshopts_pop +} |