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| author |   David Seifert <soap@gentoo.org> | 2024-05-24 10:59:49 +0200 |
|---|---|---|
| committer | David Seifert <soap@gentoo.org> | 2024-05-24 10:59:49 +0200 |
| commit | dda90e924ca655b36afed52816962a71629b824d (patch) | |
| tree | c1c34818db679a56b12d40e8ccc05f45096bc325 /sci-libs | |
| parent | sci-libs/htslib: drop 1.17 (diff) | |
| download | gentoo-dda90e924ca655b36afed52816962a71629b824d.tar.gz gentoo-dda90e924ca655b36afed52816962a71629b824d.tar.bz2 gentoo-dda90e924ca655b36afed52816962a71629b824d.zip | |
sci-libs/htslib: add 1.20
Signed-off-by: David Seifert <soap@gentoo.org>
Diffstat (limited to 'sci-libs')
| -rw-r--r-- | sci-libs/htslib/Manifest | 1 | ||||
| -rw-r--r-- | sci-libs/htslib/htslib-1.20.ebuild | 52 |
2 files changed, 53 insertions, 0 deletions
diff --git a/sci-libs/htslib/Manifest b/sci-libs/htslib/Manifest index 234d7092da4d..0110e7bb188d 100644 --- a/sci-libs/htslib/Manifest +++ b/sci-libs/htslib/Manifest @@ -1 +1,2 @@ DIST htslib-1.19.1.tar.bz2 4775086 BLAKE2B 3af6770ade9505a3c71f6d522c0971eb77ea2549670043a539a2a4681e583554dc154b9b9fb33f1faa94be336a09945a28c57aa4bcfe0f39b03dd7585c49269a SHA512 a40de47ecae68756c158c1c7b578fa2a5c13bf6f98626e863af31a20d7880ffd415d966280c00bfe726f496d913eb0fcf014dd4beb8c1dbe36ed9735a48bd01e +DIST htslib-1.20.tar.bz2 4779028 BLAKE2B def7a135f37a4c7a167ada554b92b0e0107ab3dcbdab69abdea387035159f40fb183477275c137b0d786fdfc7264303898f98c54acb1714f9b7cb21e22612143 SHA512 a156f5c895fdae77f976f463a2d4d1111dc056893ef45b7e9cf62e9115898bc8cb47465bb1779e534c26943df478892385d44646e97bd0fa67fceb83ef7a649b diff --git a/sci-libs/htslib/htslib-1.20.ebuild b/sci-libs/htslib/htslib-1.20.ebuild new file mode 100644 index 000000000000..2a38fa8634c8 --- /dev/null +++ b/sci-libs/htslib/htslib-1.20.ebuild @@ -0,0 +1,52 @@ +# Copyright 1999-2024 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +inherit toolchain-funcs + +DESCRIPTION="C library for high-throughput sequencing data formats" +HOMEPAGE="http://www.htslib.org/" +SRC_URI="https://github.com/samtools/${PN}/releases/download/${PV}/${P}.tar.bz2" + +LICENSE="MIT" +SLOT="0/3" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +IUSE="+bzip2 curl +lzma" + +RDEPEND=" + sys-libs/zlib + bzip2? ( app-arch/bzip2 ) + curl? ( net-misc/curl ) + lzma? ( app-arch/xz-utils )" +DEPEND="${RDEPEND}" + +src_prepare() { + default + + # upstream injects LDFLAGS into the .pc file, + # which is a big nono for QA + sed -e '/^\(static_l\|Libs.private\|Requires.private\)/d' \ + -i htslib.pc.in || die +} + +src_configure() { + econf \ + --disable-gcs \ + --disable-plugins \ + --disable-s3 \ + $(use_enable bzip2 bz2) \ + $(use_enable curl libcurl) \ + $(use_enable lzma) +} + +src_compile() { + emake AR="$(tc-getAR)" +} + +src_install() { + default + + # doesn't use libtool, can't disable static libraries + find "${ED}" -name '*.a' -delete || die +} |