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Diffstat (limited to 'sci-biology/velvet/velvet-0.7.34.ebuild')
-rw-r--r--sci-biology/velvet/velvet-0.7.34.ebuild40
1 files changed, 0 insertions, 40 deletions
diff --git a/sci-biology/velvet/velvet-0.7.34.ebuild b/sci-biology/velvet/velvet-0.7.34.ebuild
deleted file mode 100644
index 1caac6c8fcc8..000000000000
--- a/sci-biology/velvet/velvet-0.7.34.ebuild
+++ /dev/null
@@ -1,40 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/velvet/velvet-0.7.34.ebuild,v 1.1 2009/06/21 14:49:00 weaver Exp $
-
-EAPI="2"
-
-MY_P="${PN}_${PV}"
-
-DESCRIPTION="A sequence assembler for very short reads"
-HOMEPAGE="http://www.ebi.ac.uk/~zerbino/velvet/"
-SRC_URI="http://www.ebi.ac.uk/~zerbino/velvet/${MY_P}.tgz"
-
-LICENSE="GPL-2"
-SLOT="0"
-IUSE=""
-KEYWORDS="~amd64 ~x86"
-
-DEPEND=""
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${MY_P}"
-
-src_prepare() {
- rm -rf "${S}"/third-party/zlib*
- sed -i -e '/\(CFLAGS\|LDFLAGS\|Z_LIB_DIR\|Z_LIB_FILES\) *= */d' \
- -e '1 a CFLAGS+= -Wall' -e '1 a LDFLAGS+= -lm -lz' \
- -e '/default :/ s/zlib//' -e '/color :/ s/zlib//' \
- "${S}"/Makefile || die
- sed -i -e '/zlib.h/d' -e '1 i #include <zlib.h>' "${S}"/src/readSet.c || die
-}
-
-src_compile() {
- emake -j1 || die
- emake -j1 color || die
-}
-
-src_install() {
- dobin velvet{g,h,g_de,h_de} third-party/layout/graph2.py third-party/afg_handling/*.pl || die
- dodoc Manual.pdf CREDITS.txt
-}