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-rw-r--r--app-sci/bioperl/Manifest8
-rw-r--r--app-sci/chessbrain/Manifest8
-rw-r--r--app-sci/foldingathome/Manifest8
-rw-r--r--app-sci/gturing/Manifest4
-rw-r--r--app-sci/hmmer/Manifest6
-rw-r--r--app-sci/kemistry/Manifest6
-rw-r--r--app-sci/klogic/Manifest2
-rw-r--r--app-sci/ksetiwatch/Manifest8
-rw-r--r--app-sci/libnova/Manifest4
-rw-r--r--app-sci/lightspeed/Manifest4
-rw-r--r--app-sci/ncbi-tools/Manifest8
-rw-r--r--app-sci/phylip/Manifest4
-rw-r--r--app-sci/predict/Manifest4
-rw-r--r--app-sci/setimgr/Manifest4
-rw-r--r--app-sci/spectromatic/Manifest4
-rw-r--r--app-sci/yacas/Manifest8
16 files changed, 45 insertions, 45 deletions
diff --git a/app-sci/bioperl/Manifest b/app-sci/bioperl/Manifest
index cdb449eb1566..5c867e24e60f 100644
--- a/app-sci/bioperl/Manifest
+++ b/app-sci/bioperl/Manifest
@@ -1,6 +1,6 @@
-MD5 b3dfb0c5ae5c8a1bfb4f99e6bf8c4cb1 ChangeLog 594
-MD5 4b53e5b83a67807a46ba90f2260fddb0 bioperl-1.2.ebuild 1572
-MD5 baad623047a6890e3fab7ae888233850 bioperl-1.0.2.ebuild 1551
MD5 dfdb9921cbef92f60e9746a9531d8de7 files/digest-bioperl-1.0.2 66
-MD5 14b9e16331895fe40e231065f7dda942 files/digest-bioperl-1.2 64
MD5 1828ff2ba6225e17a98d27bfbad5c7c9 files/bioperl-1.2-manpage.diff 712
+MD5 14b9e16331895fe40e231065f7dda942 files/digest-bioperl-1.2 64
+MD5 8e47663b52056acabfe389fff6515abd bioperl-1.0.2.ebuild 1549
+MD5 b3dfb0c5ae5c8a1bfb4f99e6bf8c4cb1 ChangeLog 594
+MD5 4b53e5b83a67807a46ba90f2260fddb0 bioperl-1.2.ebuild 1572
diff --git a/app-sci/chessbrain/Manifest b/app-sci/chessbrain/Manifest
index 994c45015793..c1828ca2df86 100644
--- a/app-sci/chessbrain/Manifest
+++ b/app-sci/chessbrain/Manifest
@@ -1,9 +1,9 @@
-MD5 fd5d79af421f6c2d74f2e60837dda66d ChangeLog 944
-MD5 9b36e43c2614509209b63121c6d5ceba chessbrain-20304.ebuild 1335
-MD5 d4288d852760b8d71d172c99260d7453 chessbrain-20310.ebuild 1335
-MD5 0425ec7a70022eeea5a5f545011da426 chessbrain-20314.ebuild 1334
MD5 f57d768a4f95e3286a5797a484257986 files/cb-conf.d 111
MD5 628a940ece7bcac03be879283f329f06 files/cb-init.d 1212
MD5 e18729e51c3ce1b9820531f4acdbeb90 files/digest-chessbrain-20304 67
MD5 d9ce018120fb88dafada6c2e37234e04 files/digest-chessbrain-20310 67
MD5 21546836ab82e2c40703f8d5a6c57491 files/digest-chessbrain-20314 67
+MD5 156ee0b725446ae3f4122f690b65d86b ChangeLog 941
+MD5 d2bd9479af650bb02c8975a02e0a45b2 chessbrain-20304.ebuild 1332
+MD5 065b4df8b80f0523e3f426dd994c242e chessbrain-20310.ebuild 1332
+MD5 0425ec7a70022eeea5a5f545011da426 chessbrain-20314.ebuild 1334
diff --git a/app-sci/foldingathome/Manifest b/app-sci/foldingathome/Manifest
index 18c48feef300..ee5bb8b307b8 100644
--- a/app-sci/foldingathome/Manifest
+++ b/app-sci/foldingathome/Manifest
@@ -1,6 +1,6 @@
-MD5 7536668701da7f7dcf6729a041c59d3c ChangeLog 1086
-MD5 a4bb0e9993806b0fdc3d2a585ca0059b foldingathome-3.14.ebuild 1120
-MD5 56f406edebe07442520c92497e593815 foldingathome-3.24.ebuild 1311
MD5 507a00167f75ffe5044d132a477cdd8b files/digest-foldingathome-3.14 66
-MD5 ad7ecc18b7b0f523434d668ba40295f4 files/digest-foldingathome-3.24 143
MD5 2ce9c3c1a96617c6caadff6e24ef32e9 files/folding-init.d 539
+MD5 ad7ecc18b7b0f523434d668ba40295f4 files/digest-foldingathome-3.24 143
+MD5 5c26c03a2b43eb175769a75e941badec foldingathome-3.14.ebuild 1117
+MD5 7536668701da7f7dcf6729a041c59d3c ChangeLog 1086
+MD5 e95be0e5334a02a9e9d86940c433b1d4 foldingathome-3.24.ebuild 1310
diff --git a/app-sci/gturing/Manifest b/app-sci/gturing/Manifest
index c373cfb8d7bf..55a2ef2324bf 100644
--- a/app-sci/gturing/Manifest
+++ b/app-sci/gturing/Manifest
@@ -1,4 +1,4 @@
+MD5 4e495972145cafe97e445160e6cde60e files/digest-gturing-0.1.1 66
MD5 9035d3def977614f7e2adb99cacebda4 gturing-0.1.1.ebuild 578
-MD5 2c8d7fb9356045a3cbcd74e4e272af65 ChangeLog 356
+MD5 07ea1920620687a2e5eef5eebed97180 ChangeLog 361
MD5 8c623e53daafa025137077c6b65815bd metadata.xml 156
-MD5 4e495972145cafe97e445160e6cde60e files/digest-gturing-0.1.1 66
diff --git a/app-sci/hmmer/Manifest b/app-sci/hmmer/Manifest
index ef4da39ca6ac..059dcf90f260 100644
--- a/app-sci/hmmer/Manifest
+++ b/app-sci/hmmer/Manifest
@@ -1,4 +1,4 @@
-MD5 a676c9096480978d032ed2b58efceabf hmmer-2.2g.ebuild 903
-MD5 89b013567d8503b76ba599f0e19707ba ChangeLog 387
-MD5 bd33e448c26a59469256420a3b920600 files/digest-hmmer-2.2g 62
MD5 9fbc129db1a886510ff026fd89e131f1 files/Makefile-hmmer-2.2g.patch 1040
+MD5 bd33e448c26a59469256420a3b920600 files/digest-hmmer-2.2g 62
+MD5 89b013567d8503b76ba599f0e19707ba ChangeLog 387
+MD5 b986f95d0c0cb7e676d3b91bec2ab165 hmmer-2.2g.ebuild 901
diff --git a/app-sci/kemistry/Manifest b/app-sci/kemistry/Manifest
index ae332b87ad43..a88e45027967 100644
--- a/app-sci/kemistry/Manifest
+++ b/app-sci/kemistry/Manifest
@@ -1,6 +1,6 @@
-MD5 d1cc1a2690ee129635535bd61671f858 ChangeLog 874
-MD5 d896077627bbb2ef96394d53cde14d33 kemistry-0.6.ebuild 550
-MD5 9e70dd5f8e51416166a96f62b0be8943 kemistry-0.7.ebuild 488
MD5 3f2cfa5242a8209eb005aa688f7e161b files/digest-kemistry-0.6 66
MD5 ff459344a766830061d4245b51081a7c files/digest-kemistry-0.7 66
MD5 50e1d5c2a24f011bf95f4f52408c7ad1 files/kemistry-0.6-gcc3.2.patch 1736
+MD5 d896077627bbb2ef96394d53cde14d33 kemistry-0.6.ebuild 550
+MD5 9ed9b08de2b8e8b9aecb241e1fca163b kemistry-0.7.ebuild 485
+MD5 d1cc1a2690ee129635535bd61671f858 ChangeLog 874
diff --git a/app-sci/klogic/Manifest b/app-sci/klogic/Manifest
index 302052a2b09b..fd14519f9158 100644
--- a/app-sci/klogic/Manifest
+++ b/app-sci/klogic/Manifest
@@ -1,3 +1,3 @@
MD5 7833a2568878d3a8278ca098ebe81891 files/digest-klogic-1.5 63
-MD5 552670c6eb8d57a8539be80dc4977689 klogic-1.5.ebuild 483
+MD5 f1cf3d3ab3757ae62798ebb122e5c7d1 klogic-1.5.ebuild 481
MD5 ec7995c5839fdad2147a2462c5abae5b ChangeLog 371
diff --git a/app-sci/ksetiwatch/Manifest b/app-sci/ksetiwatch/Manifest
index c8682c9f6fc1..99add09d338e 100644
--- a/app-sci/ksetiwatch/Manifest
+++ b/app-sci/ksetiwatch/Manifest
@@ -1,7 +1,7 @@
-MD5 43b3d3ce93a5311f8cce9d602661eaad ChangeLog 823
-MD5 82e362f6faf62110bc0e7037679dbc73 ksetiwatch-2.5.0.ebuild 534
-MD5 4de15392d219a916f8fab81e0b903fca ksetiwatch-2.5.1.ebuild 522
-MD5 486df5cbe0f55106362e0df018325547 ksetiwatch-2.6.0.ebuild 515
MD5 d5c947fe3f412d5c8746be6485a2eada files/digest-ksetiwatch-2.5.0 71
MD5 b726cb828713bd794cef854ccad4d353 files/digest-ksetiwatch-2.5.1 69
MD5 6411c0e9981436a8fb0c6e59ab938336 files/digest-ksetiwatch-2.6.0 69
+MD5 82e362f6faf62110bc0e7037679dbc73 ksetiwatch-2.5.0.ebuild 534
+MD5 4de15392d219a916f8fab81e0b903fca ksetiwatch-2.5.1.ebuild 522
+MD5 43b3d3ce93a5311f8cce9d602661eaad ChangeLog 823
+MD5 effdc36072f384e8c852b9a89c280321 ksetiwatch-2.6.0.ebuild 512
diff --git a/app-sci/libnova/Manifest b/app-sci/libnova/Manifest
index 2a6e83ad6421..bc2e2977306a 100644
--- a/app-sci/libnova/Manifest
+++ b/app-sci/libnova/Manifest
@@ -1,3 +1,3 @@
-MD5 09c1a87f5ea3df5bcaaa797bdf2fd4af libnova-0.7.0.ebuild 985
-MD5 4ee9a71e129b9feb74648b3e64a240c7 ChangeLog 337
MD5 2f9b1d8c58abbf9f2a31ada790493ce7 files/digest-libnova-0.7.0 66
+MD5 4ee9a71e129b9feb74648b3e64a240c7 ChangeLog 337
+MD5 bfeaa0a336f41e6c50771f9dc352b19e libnova-0.7.0.ebuild 980
diff --git a/app-sci/lightspeed/Manifest b/app-sci/lightspeed/Manifest
index 6eb4d2d6fb52..ffaed37b7778 100644
--- a/app-sci/lightspeed/Manifest
+++ b/app-sci/lightspeed/Manifest
@@ -1,3 +1,3 @@
-MD5 b08ae526f021cfa662336aa4395a6ddb ChangeLog 434
-MD5 e7b43732e7fb2b44ae39025729e5b921 lightspeed-1.2a.ebuild 1166
MD5 31ecec601dfd11e746121559c07fabe2 files/digest-lightspeed-1.2a 128
+MD5 f69ff251ad2f5efbac352a1a35ed548e lightspeed-1.2a.ebuild 1163
+MD5 b08ae526f021cfa662336aa4395a6ddb ChangeLog 434
diff --git a/app-sci/ncbi-tools/Manifest b/app-sci/ncbi-tools/Manifest
index 1648021b1bc0..a8c3ce34f6ec 100644
--- a/app-sci/ncbi-tools/Manifest
+++ b/app-sci/ncbi-tools/Manifest
@@ -1,7 +1,7 @@
-MD5 109833db222386d7b9090a7d74915452 ncbi-tools-04222003.ebuild 2171
-MD5 603ebf642357bff1c588978d97491e7e ChangeLog 587
-MD5 3ff7b645a618cfcf976de72963c0d834 ncbi-tools-04222003-r1.ebuild 2283
-MD5 14127812e393e96ae78632a71f4a9f01 files/digest-ncbi-tools-04222003 114
MD5 7c726288b5f5fd1f2fafcf08a7ffa267 files/dot-ncbirc 26
MD5 a3e32aea6e4015a69b50f7579e4f3c8e files/21ncbi 140
+MD5 14127812e393e96ae78632a71f4a9f01 files/digest-ncbi-tools-04222003 114
MD5 14127812e393e96ae78632a71f4a9f01 files/digest-ncbi-tools-04222003-r1 114
+MD5 603ebf642357bff1c588978d97491e7e ChangeLog 587
+MD5 405bda1ddf967adb78b7b62bd1f50591 ncbi-tools-04222003-r1.ebuild 2281
+MD5 e551280dd1104568347d2dd07c411432 ncbi-tools-04222003.ebuild 2169
diff --git a/app-sci/phylip/Manifest b/app-sci/phylip/Manifest
index 79d9599e6ea0..ee47226ea30a 100644
--- a/app-sci/phylip/Manifest
+++ b/app-sci/phylip/Manifest
@@ -1,3 +1,3 @@
-MD5 9b3bd37d3a745264df679daf2c52efcf phylip-3.5.ebuild 1482
-MD5 548ace8a77658c0de6139acdc96655e9 ChangeLog 398
MD5 cfa8a22ac65037bfe8dfefda7c4171f5 files/digest-phylip-3.5 57
+MD5 548ace8a77658c0de6139acdc96655e9 ChangeLog 398
+MD5 d86b25e13fe8070a700237f45dff4cf2 phylip-3.5.ebuild 1480
diff --git a/app-sci/predict/Manifest b/app-sci/predict/Manifest
index 2857a8262d62..4d514df192fc 100644
--- a/app-sci/predict/Manifest
+++ b/app-sci/predict/Manifest
@@ -1,3 +1,3 @@
-MD5 4eba43e8854212980b9dd6aa25f21c8e ChangeLog 422
-MD5 a645b97f6cca8bbe10e8b689bea633f2 predict-2.2.1.ebuild 4591
MD5 e9851bdcd10870d0cf8dd12a543acb05 files/digest-predict-2.2.1 65
+MD5 679ff1355afcdb22d536b1a3b7a48907 predict-2.2.1.ebuild 4586
+MD5 4eba43e8854212980b9dd6aa25f21c8e ChangeLog 422
diff --git a/app-sci/setimgr/Manifest b/app-sci/setimgr/Manifest
index 07240552bdfc..5e332f2b609c 100644
--- a/app-sci/setimgr/Manifest
+++ b/app-sci/setimgr/Manifest
@@ -1,3 +1,3 @@
MD5 67c33323344646c8df00d04a1be8ee45 files/digest-setimgr-0.04e 64
-MD5 b55b3555cc976a037df8a1ca6a07344f ChangeLog 379
-MD5 af8f6df4eba495114e3487335ba3864a setimgr-0.04e.ebuild 636
+MD5 e63f25ce7f04818b5c95574504abd3bc ChangeLog 376
+MD5 a8b9985f360403089bbb3cabc94c093c setimgr-0.04e.ebuild 635
diff --git a/app-sci/spectromatic/Manifest b/app-sci/spectromatic/Manifest
index 2b6db779c58c..41b39c04288d 100644
--- a/app-sci/spectromatic/Manifest
+++ b/app-sci/spectromatic/Manifest
@@ -1,4 +1,4 @@
-MD5 aa395b35d667f8a17e4e896da4862337 ChangeLog 380
-MD5 818861053f47cdb9d20f6022dc07fcbe spectromatic-1.0.ebuild 894
MD5 23d4c34b3e33e1ed27f69a9d41c34220 files/digest-spectromatic-1.0 69
MD5 3f1f11cd807e925f279e51c239688289 files/spectromatic-1.0-gentoo.diff 603
+MD5 8241b4a4a4cf09d8841cf559467519ca spectromatic-1.0.ebuild 891
+MD5 aa395b35d667f8a17e4e896da4862337 ChangeLog 380
diff --git a/app-sci/yacas/Manifest b/app-sci/yacas/Manifest
index cb0bc7634087..be401ed46258 100644
--- a/app-sci/yacas/Manifest
+++ b/app-sci/yacas/Manifest
@@ -1,6 +1,6 @@
-MD5 9e0338851ba142d0ce6a4252f34f7cb6 yacas-1.0.55.ebuild 1390
-MD5 2a05df51640b77aaa154f23be7aeced3 yacas-1.0.54.ebuild 1389
-MD5 7ee35dcb752ea7841e68dd6df8f12d60 ChangeLog 709
-MD5 8c623e53daafa025137077c6b65815bd metadata.xml 156
MD5 1bc407af698756810b2529f3c253a402 files/digest-yacas-1.0.54 65
MD5 1ba5c4a16d348ff13ea579fe92cc7ef8 files/digest-yacas-1.0.55 65
+MD5 8c623e53daafa025137077c6b65815bd metadata.xml 156
+MD5 2a05df51640b77aaa154f23be7aeced3 yacas-1.0.54.ebuild 1389
+MD5 9e0338851ba142d0ce6a4252f34f7cb6 yacas-1.0.55.ebuild 1390
+MD5 a42a81276a3aa165046091776caf85c3 ChangeLog 708