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| author |   Andrey Kislyuk <weaver@gentoo.org> | 2012-02-28 05:27:53 +0000 |
|---|---|---|
| committer | Andrey Kislyuk <weaver@gentoo.org> | 2012-02-28 05:27:53 +0000 |
| commit | de785eaf68d93bbe992332b609e85669945bf6f1 (patch) | |
| tree | 2ee96d437e30055a796e0f649d5376d78226daa8 /sci-biology/picard | |
| parent | Only pass with-branding if bindist build (diff) | |
| download | historical-de785eaf68d93bbe992332b609e85669945bf6f1.tar.gz historical-de785eaf68d93bbe992332b609e85669945bf6f1.tar.bz2 historical-de785eaf68d93bbe992332b609e85669945bf6f1.zip | |
Version bump
Package-Manager: portage-2.2.0_alpha74/cvs/Linux x86_64
Diffstat (limited to 'sci-biology/picard')
| -rw-r--r-- | sci-biology/picard/ChangeLog | 7 | ||||
| -rw-r--r-- | sci-biology/picard/Manifest | 9 | ||||
| -rw-r--r-- | sci-biology/picard/picard-1.63.ebuild | 38 |
3 files changed, 49 insertions, 5 deletions
diff --git a/sci-biology/picard/ChangeLog b/sci-biology/picard/ChangeLog index 2bc632b203ca..792b3b970109 100644 --- a/sci-biology/picard/ChangeLog +++ b/sci-biology/picard/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/picard # Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/picard/ChangeLog,v 1.1 2012/01/04 03:41:51 weaver Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/picard/ChangeLog,v 1.2 2012/02/28 05:27:53 weaver Exp $ + +*picard-1.63 (28 Feb 2012) + + 28 Feb 2012; Andrey Kislyuk <weaver@gentoo.org> +picard-1.63.ebuild: + Version bump *picard-1.58 (04 Jan 2012) diff --git a/sci-biology/picard/Manifest b/sci-biology/picard/Manifest index c0e6362c88d5..6a1ac83547d3 100644 --- a/sci-biology/picard/Manifest +++ b/sci-biology/picard/Manifest @@ -2,12 +2,13 @@ Hash: SHA1 EBUILD picard-1.58.ebuild 1052 RMD160 a687bd6ec8a6b6d1ef8fef214b25df82da644ac3 SHA1 fb06598dfb055fd975f835f50503fbba718cf520 SHA256 5b97cee24c7b6edc70efa00d2e8180c1d8790e25daa3edccbd9f963adee21725 -MISC ChangeLog 362 RMD160 5e67d7379b4a19f3c731dcce1468763894c3538a SHA1 6292932c3eeeb10f65c62453f1cc5f1af3b47375 SHA256 5f7ecc0b7339f01cf135b792d3f5efbb26bcbd2dabba257299555bdb23dd4af8 +EBUILD picard-1.63.ebuild 1052 RMD160 87f2ee207911d59e03ad816b1c822d08643fdd02 SHA1 d2261b8944142041511470b0a6056cd7e43f6574 SHA256 7b5e15effed2459cb93cf7e3fffdfd0083b2d6a2be28d828a4a48b06c6b227f7 +MISC ChangeLog 477 RMD160 7484dd8005750f765511cf91c936864e3a85b516 SHA1 d80b16c8231170ffa26045a13339ab9b8eb901cd SHA256 536febfd871e6b5170077aa4d430f16470429e36d5aa65c087729fcdeaadf4e8 MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110 -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.11 (GNU/Linux) -iEYEARECAAYFAk8DyoUACgkQ8xSwyhbn2Oa3qACfZSRGVzF4kvQYNeVN///hPiua -7q0AmwfbNaAv6LYos4/XpmX3Owm03Liq -=Mgj0 +iEYEARECAAYFAk9MZd8ACgkQ8xSwyhbn2OZXRwCgoUgDR7dwfTY2X7/IVyklhxyh +XQQAnR5ybKPGpedS7nZ6WuzrrFWUdMnh +=8SWV -----END PGP SIGNATURE----- diff --git a/sci-biology/picard/picard-1.63.ebuild b/sci-biology/picard/picard-1.63.ebuild new file mode 100644 index 000000000000..ccec0120b474 --- /dev/null +++ b/sci-biology/picard/picard-1.63.ebuild @@ -0,0 +1,38 @@ +# Copyright 1999-2012 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/picard/picard-1.63.ebuild,v 1.1 2012/02/28 05:27:53 weaver Exp $ + +EAPI=4 + +#ESVN_REPO_URI="https://picard.svn.sourceforge.net/svnroot/picard/trunk" +ESVN_REPO_URI="https://picard.svn.sourceforge.net/svnroot/picard/tags/${PV}" + +EANT_BUILD_TARGET="all" +JAVA_ANT_REWRITE_CLASSPATH="true" +EANT_NEEDS_TOOLS="true" +WANT_ANT_TASKS="ant-apache-bcel" + +inherit subversion java-pkg-2 java-ant-2 + +DESCRIPTION="Java-based command-line utilities that manipulate SAM files" +HOMEPAGE="http://picard.sourceforge.net/" +SRC_URI="" +LICENSE="Apache-2.0" +SLOT="0" +IUSE="" +KEYWORDS="~amd64" + +COMMON_DEPS="" +DEPEND=">=virtual/jdk-1.6 + dev-java/ant-apache-bcel:0 + app-arch/zip + ${COMMON_DEPS}" +RDEPEND=">=virtual/jre-1.6 + ${COMMON_DEPS}" + +src_install() { + cd dist + for i in *-${PV}.jar; do java-pkg_newjar $i ${i/-${PV}/}; rm $i; done + java-pkg_dojar *.jar + for i in *.jar; do java-pkg_dolauncher ${i/.jar/} --jar $i; done +} |