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# Copyright 1999-2024 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
PYTHON_COMPAT=( python3_{11..12} )
DISTUTILS_USE_PEP517=setuptools
inherit distutils-r1
DESCRIPTION="Make-like task language"
HOMEPAGE="https://snakemake.readthedocs.io"
SRC_URI="https://github.com/${PN}/${PN}/archive/v${PV}.tar.gz -> ${P}.gh.tar.gz"
LICENSE="MIT"
SLOT="0"
KEYWORDS="~amd64"
# cannot import name '_helpers' from 'google.cloud'
RESTRICT="test"
BDEPEND="
dev-python/tomli[${PYTHON_USEDEP}]
test? (
dev-python/requests-mock[${PYTHON_USEDEP}]
dev-python/google-api-python-client[${PYTHON_USEDEP}]
dev-python/networkx[${PYTHON_USEDEP}]
dev-python/pygments[${PYTHON_USEDEP}]
dev-python/pygraphviz[${PYTHON_USEDEP}]
net-libs/google-cloud-cpp
)
"
RDEPEND="
dev-python/appdirs[${PYTHON_USEDEP}]
dev-python/immutables[${PYTHON_USEDEP}]
dev-python/ConfigArgParse[${PYTHON_USEDEP}]
>=dev-python/connection_pool-0.0.3[${PYTHON_USEDEP}]
dev-python/datrie[${PYTHON_USEDEP}]
dev-python/docutils[${PYTHON_USEDEP}]
dev-python/GitPython[${PYTHON_USEDEP}]
dev-python/humanfriendly[${PYTHON_USEDEP}]
>=dev-python/jinja-3.0[${PYTHON_USEDEP}]
dev-python/jsonschema[${PYTHON_USEDEP}]
dev-python/nbformat[${PYTHON_USEDEP}]
dev-python/packaging[${PYTHON_USEDEP}]
dev-python/psutil[${PYTHON_USEDEP}]
dev-python/pyyaml[${PYTHON_USEDEP}]
>=dev-python/requests-2.8.1[${PYTHON_USEDEP}]
dev-python/reretry[${PYTHON_USEDEP}]
>=dev-python/smart-open-4.0[${PYTHON_USEDEP}]
>=dev-python/snakemake-interface-common-1.17.0[${PYTHON_USEDEP}]
>=dev-python/snakemake-interface-executor-plugins-9.2.0[${PYTHON_USEDEP}]
>=dev-python/snakemake-interface-storage-plugins-3.2.3[${PYTHON_USEDEP}]
>=dev-python/snakemake-interface-report-plugins-1.0.0[${PYTHON_USEDEP}]
dev-python/stopit[${PYTHON_USEDEP}]
dev-python/tabulate[${PYTHON_USEDEP}]
dev-python/throttler[${PYTHON_USEDEP}]
>=dev-python/toposort-1.10[${PYTHON_USEDEP}]
dev-python/wrapt[${PYTHON_USEDEP}]
>=dev-python/yte-1.5.1[${PYTHON_USEDEP}]
>=dev-python/dpath-2.1.6[${PYTHON_USEDEP}]
>=dev-python/conda-inject-1.3.1[${PYTHON_USEDEP}]
>=sci-mathematics/pulp-2.3.1[${PYTHON_USEDEP}]
"
# distutils_enable_sphinx docs \
# dev-python/sphinxcontrib-napoleon \
# dev-python/sphinx-argparse \
# dev-python/sphinx-rtd-theme \
# dev-python/docutils \
# dev-python/recommonmark \
# dev-python/myst-parser
distutils_enable_tests pytest
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