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| author |   Alexey Shvetsov <alexxy@gentoo.org> | 2024-09-29 16:31:30 +0300 |
|---|---|---|
| committer | Alexey Shvetsov <alexxy@gentoo.org> | 2024-09-29 16:33:31 +0300 |
| commit | fd08b2a5d7d48adea7a3f1d07d3783c15ce0f24b (patch) | |
| tree | 81709eccb4f0e6d9a35b53af2d9ca4425a4270aa | |
| parent | dev-python/dnaio: new package, add 1.2.1 (diff) | |
| download | sci-fd08b2a5d7d48adea7a3f1d07d3783c15ce0f24b.tar.gz sci-fd08b2a5d7d48adea7a3f1d07d3783c15ce0f24b.tar.bz2 sci-fd08b2a5d7d48adea7a3f1d07d3783c15ce0f24b.zip | |
sci-biology/cutadapt: new package, add 4.9
Signed-off-by: Alexey Shvetsov <alexxy@gentoo.org>
| -rw-r--r-- | sci-biology/cutadapt/Manifest | 1 | ||||
| -rw-r--r-- | sci-biology/cutadapt/cutadapt-4.9.ebuild | 28 | ||||
| -rw-r--r-- | sci-biology/cutadapt/metadata.xml | 12 |
3 files changed, 41 insertions, 0 deletions
diff --git a/sci-biology/cutadapt/Manifest b/sci-biology/cutadapt/Manifest new file mode 100644 index 000000000..9b1b4fa20 --- /dev/null +++ b/sci-biology/cutadapt/Manifest @@ -0,0 +1 @@ +DIST cutadapt-4.9.tar.gz 248837 BLAKE2B a95e510801572046689899315283d958933b625a10f57177811bbeae020b7a8f09c919cd15adabac64adbf550cdd901e078cd76cebdc0a1bbf80223584291242 SHA512 332de05a0fd11c07749ee58c171d79699776cae4a0338b7586f9e2939fb9f313b1647388bb4f060b7603e80b94b5b0da54a5e825fab862d6bf3c45b0c02fda0b diff --git a/sci-biology/cutadapt/cutadapt-4.9.ebuild b/sci-biology/cutadapt/cutadapt-4.9.ebuild new file mode 100644 index 000000000..cd1a8fe7c --- /dev/null +++ b/sci-biology/cutadapt/cutadapt-4.9.ebuild @@ -0,0 +1,28 @@ +# Copyright 1999-2020 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +PYTHON_COMPAT=( python3_{10..13} ) +DISTUTILS_USE_PEP517=setuptools + +inherit distutils-r1 pypi + +DESCRIPTION="Adapter trimming and other preprocessing of high-throughput sequencing reads" +HOMEPAGE="https://github.com/marcelm/cutadapt/" +SRC_URI="$(pypi_sdist_url "${PN^}" "${PV}")" + +LICENSE="MIT" +SLOT="0" +KEYWORDS="~amd64" + +IUSE="test" +DEPEND=" + >=dev-python/xopen-1.6.0[${PYTHON_USEDEP}] + >=dev-python/dnaio-1.2.0[${PYTHON_USEDEP}] +" +RDEPEND=" + ${DEPEND} + test? ( dev-python/pytest ) +" +distutils_enable_tests pytest diff --git a/sci-biology/cutadapt/metadata.xml b/sci-biology/cutadapt/metadata.xml new file mode 100644 index 000000000..028038de8 --- /dev/null +++ b/sci-biology/cutadapt/metadata.xml @@ -0,0 +1,12 @@ +<?xml version='1.0' encoding='UTF-8'?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science</name> + </maintainer> + <upstream> + <remote-id type="pypi">cutadapt</remote-id> + <remote-id type="github">marcelm/cutadapt</remote-id> + </upstream> +</pkgmetadata> |