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Diffstat (limited to 'sci-biology/transfac/transfac-3.2.ebuild')
| -rw-r--r-- | sci-biology/transfac/transfac-3.2.ebuild | 35 |
1 files changed, 35 insertions, 0 deletions
diff --git a/sci-biology/transfac/transfac-3.2.ebuild b/sci-biology/transfac/transfac-3.2.ebuild new file mode 100644 index 000000000000..7379a01a5449 --- /dev/null +++ b/sci-biology/transfac/transfac-3.2.ebuild @@ -0,0 +1,35 @@ +# Copyright 1999-2004 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/transfac/transfac-3.2.ebuild,v 1.1 2004/12/23 21:28:10 ribosome Exp $ + +DESCRIPTION="A database of eucaryotic transcription factors" +HOMEPAGE="http://www.gene-regulation.com/pub/databases.html" +SRC_URI="ftp://ftp.ebi.ac.uk/pub/databases/${PN}/${PN}32.tar.Z" +LICENSE="public-domain" + +SLOT="3" +KEYWORDS="x86 ~ppc" +IUSE="no-emboss no-rawdb" + +S=${WORKDIR} + +src_compile() { + # Index the database for use with emboss if emboss is installed and + # the user did not explicitly request not to index the database. + if [ -e /usr/bin/tfextract ] && ! use no-emboss; then + einfo "Indexing TRANSFAC for usage with EMBOSS." + EMBOSS_DATA=. tfextract -auto -infile class.dat || die \ + "Indexing TRANSFAC failed." + fi +} + +src_install() { + if ! use no-rawdb; then + insinto /usr/share/${PN}-${SLOT} + doins *.dat + fi + if [ -e /usr/bin/tfextract ] && ! use no-emboss; then + insinto /usr/share/EMBOSS/data + doins tf* + fi +} |