diff options
Diffstat (limited to 'dev-perl/Bio-SamTools/Bio-SamTools-1.380.0.ebuild')
| -rw-r--r-- | dev-perl/Bio-SamTools/Bio-SamTools-1.380.0.ebuild | 39 |
1 files changed, 0 insertions, 39 deletions
diff --git a/dev-perl/Bio-SamTools/Bio-SamTools-1.380.0.ebuild b/dev-perl/Bio-SamTools/Bio-SamTools-1.380.0.ebuild deleted file mode 100644 index e6e399649aec..000000000000 --- a/dev-perl/Bio-SamTools/Bio-SamTools-1.380.0.ebuild +++ /dev/null @@ -1,39 +0,0 @@ -# Copyright 1999-2013 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/dev-perl/Bio-SamTools/Bio-SamTools-1.380.0.ebuild,v 1.1 2013/08/17 14:02:59 patrick Exp $ - -EAPI=4 - -MODULE_AUTHOR=LDS -MODULE_VERSION=1.38 -inherit perl-module - -DESCRIPTION="Read SAM/BAM database files" - -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="" - -RDEPEND="sci-biology/bioperl - >=sci-biology/samtools-0.1.16" -DEPEND="${RDEPEND} - virtual/perl-ExtUtils-CBuilder - virtual/perl-Module-Build -" - -SRC_TEST=do - -src_prepare() { - sed \ - -e 's|my $HeaderFile = "bam.h";|my $HeaderFile = "bam/bam.h";|' \ - -e 's|my $LibFile = "libbam.a";|my $LibFile = "libbam.so";|' \ - -i Build.PL || die - sed \ - -e 's|#include "bam.h"|#include "bam/bam.h"|' \ - -e 's|#include "sam.h"|#include "bam/sam.h"|' \ - -e 's|#include "khash.h"|#include "bam/khash.h"|' \ - -e 's|#include "faidx.h"|#include "bam/faidx.h"|' \ - -i lib/Bio/DB/Sam.xs c_bin/bam2bedgraph.c || die - - perl-module_src_prepare -} |