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| author |   Andrey Kislyuk <weaver@gentoo.org> | 2009-10-29 01:47:54 +0000 |
|---|---|---|
| committer | Andrey Kislyuk <weaver@gentoo.org> | 2009-10-29 01:47:54 +0000 |
| commit | 4119d17bb3755d2ede1ac9564e031656cd43da96 (patch) | |
| tree | 313c1eb990a4dcf5f8291e2327854fa13de64560 /sci-biology | |
| parent | Version bump. Drop shared-mime-info patch as the issue has been fixed upstream. (diff) | |
| download | gentoo-2-4119d17bb3755d2ede1ac9564e031656cd43da96.tar.gz gentoo-2-4119d17bb3755d2ede1ac9564e031656cd43da96.tar.bz2 gentoo-2-4119d17bb3755d2ede1ac9564e031656cd43da96.zip | |
Version bump
(Portage version: 2.2_rc30/cvs/Linux x86_64)
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/shrimp/ChangeLog | 7 | ||||
| -rw-r--r-- | sci-biology/shrimp/shrimp-1.3.0.ebuild | 34 |
2 files changed, 40 insertions, 1 deletions
diff --git a/sci-biology/shrimp/ChangeLog b/sci-biology/shrimp/ChangeLog index 1efc7605868d..a0cacc928d93 100644 --- a/sci-biology/shrimp/ChangeLog +++ b/sci-biology/shrimp/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/shrimp # Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/shrimp/ChangeLog,v 1.4 2009/09/22 14:08:40 maekke Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/shrimp/ChangeLog,v 1.5 2009/10/29 01:47:54 weaver Exp $ + +*shrimp-1.3.0 (28 Oct 2009) + + 28 Oct 2009; Andrey Kislyuk <weaver@gentoo.org> +shrimp-1.3.0.ebuild: + Version bump 22 Sep 2009; Markus Meier <maekke@gentoo.org> shrimp-1.2.1.ebuild: x86 stable, bug #283679 diff --git a/sci-biology/shrimp/shrimp-1.3.0.ebuild b/sci-biology/shrimp/shrimp-1.3.0.ebuild new file mode 100644 index 000000000000..c9e10ef40666 --- /dev/null +++ b/sci-biology/shrimp/shrimp-1.3.0.ebuild @@ -0,0 +1,34 @@ +# Copyright 1999-2009 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/shrimp/shrimp-1.3.0.ebuild,v 1.1 2009/10/29 01:47:54 weaver Exp $ + +EAPI="2" + +MY_PV=${PV//./_} + +DESCRIPTION="SHort Read Mapping Package" +HOMEPAGE="http://compbio.cs.toronto.edu/shrimp/" +SRC_URI="http://compbio.cs.toronto.edu/shrimp/releases/SHRiMP_${MY_PV}.src.tar.gz" + +LICENSE="as-is" +SLOT="0" +IUSE="" +KEYWORDS="~amd64 ~x86" + +DEPEND="" +RDEPEND="" + +S="${WORKDIR}/SHRiMP_${MY_PV}" + +src_configure() { + sed -i -e '1 a CXXFLAGS+= -O3 -mmmx -msse -msse2' \ + -e 's/-static//' "${S}/Makefile" || die +} + +src_install() { + rm bin/README + dobin bin/* || die + insinto /usr/share/${PN} + doins -r utils || die + dodoc HISTORY README TODO +} |