Add USE flag description to metadata wrt GLEP 56.

(Portage version: 2.2_rc3/cvs/Linux 2.6.25-gentoo-r6 i686)

2 files changed, 28 insertions, 19 deletions

diff --git a/sci-biology/vienna-rna/ChangeLog b/sci-biology/vienna-rna/ChangeLog
index d68bf4a80d64..72816ef39a7c 100644
--- a/sci-biology/vienna-rna/ChangeLog
+++ b/sci-biology/vienna-rna/ChangeLog
@@ -1,6 +1,9 @@
 # ChangeLog for sci-biology/vienna-rna
 # Copyright 2000-2008 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/ChangeLog,v 1.15 2008/05/01 13:13:57 markusle Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/ChangeLog,v 1.16 2008/08/06 15:06:58 ulm Exp $
+
+  06 Aug 2008; Ulrich Mueller <ulm@gentoo.org> metadata.xml:
+  Add USE flag description to metadata wrt GLEP 56.
 
 *vienna-rna-1.7.0 (01 May 2008)
 
diff --git a/sci-biology/vienna-rna/metadata.xml b/sci-biology/vienna-rna/metadata.xml
index 5115aa6e1ee4..cec7b4a6ce48 100644
--- a/sci-biology/vienna-rna/metadata.xml
+++ b/sci-biology/vienna-rna/metadata.xml
@@ -1,22 +1,28 @@
 <?xml version="1.0" encoding="UTF-8"?>
 <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
 <pkgmetadata>
-	<herd>sci-biology</herd>
-	<longdescription>
-		The Vienna RNA Package consists of a C code library and several
-		stand-alone programs for the prediction and comparison of RNA secondary
-		structures. RNA secondary structure prediction through energy
-		minimization is the most used function in the package. We provide three
-		kinds of dynamic programming algorithms for structure prediction: the
-		minimum free energy algorithm of (Zuker and Stiegler 1981) which yields a
-		single optimal structure, the partition function algorithm of
-		(McCaskill 1990) which calculates base pair probabilities in the
-		thermodynamic ensemble, and the suboptimal folding algorithm of
-		(Wuchty et.al 1999) which generates all suboptimal structures within a
-		given energy range of the optimal energy. For secondary structure
-		comparison, the package contains several measures of distance
-		(dissimilarities) using either string alignment or tree-editing
-		(Shapiro and Zhang 1990). Finally, we provide an algorithm to design
-		sequences with a predefined structure (inverse folding).
-	</longdescription>
+<herd>sci-biology</herd>
+<longdescription>
+	The Vienna RNA Package consists of a C code library and several
+	stand-alone programs for the prediction and comparison of RNA secondary
+	structures. RNA secondary structure prediction through energy
+	minimization is the most used function in the package. We provide three
+	kinds of dynamic programming algorithms for structure prediction: the
+	minimum free energy algorithm of (Zuker and Stiegler 1981) which yields a
+	single optimal structure, the partition function algorithm of
+	(McCaskill 1990) which calculates base pair probabilities in the
+	thermodynamic ensemble, and the suboptimal folding algorithm of
+	(Wuchty et.al 1999) which generates all suboptimal structures within a
+	given energy range of the optimal energy. For secondary structure
+	comparison, the package contains several measures of distance
+	(dissimilarities) using either string alignment or tree-editing
+	(Shapiro and Zhang 1990). Finally, we provide an algorithm to design
+	sequences with a predefined structure (inverse folding).
+</longdescription>
+<use>
+  <flag name='no-readseq'>Do not include the modified version of Don Gilbert's
+    readseq program</flag>
+  <flag name='no-utils'>Do not include sequence format conversion and
+    representation utilities</flag>
+</use>
 </pkgmetadata>