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| author |   Jakov Smolic <jakov.smolic@sartura.hr> | 2021-08-22 21:37:18 +0200 |
|---|---|---|
| committer |   David Seifert <soap@gentoo.org> | 2021-08-22 21:37:18 +0200 |
| commit | 3151038a1d2b980f87cf46bf6079a119a01ea3cc (patch) | |
| tree | b041b2a4ed9c054ea726ca8dff6b3489f052f00a /sci-biology/mrbayes | |
| parent | sci-biology/plink: Port to EAPI 8 (diff) | |
| download | gentoo-3151038a1d2b980f87cf46bf6079a119a01ea3cc.tar.gz gentoo-3151038a1d2b980f87cf46bf6079a119a01ea3cc.tar.bz2 gentoo-3151038a1d2b980f87cf46bf6079a119a01ea3cc.zip | |
sci-biology/mrbayes: Port to EAPI 8
Signed-off-by: Jakov Smolic <jakov.smolic@sartura.hr>
Signed-off-by: David Seifert <soap@gentoo.org>
Diffstat (limited to 'sci-biology/mrbayes')
| -rw-r--r-- | sci-biology/mrbayes/files/mb_readline_312.patch | 20 | ||||
| -rw-r--r-- | sci-biology/mrbayes/mrbayes-3.1.2-r2.ebuild | 15 |
2 files changed, 13 insertions, 22 deletions
diff --git a/sci-biology/mrbayes/files/mb_readline_312.patch b/sci-biology/mrbayes/files/mb_readline_312.patch index 2f8bab1e7665..d41986704708 100644 --- a/sci-biology/mrbayes/files/mb_readline_312.patch +++ b/sci-biology/mrbayes/files/mb_readline_312.patch @@ -1,25 +1,13 @@ -Index: Makefile -=================================================================== -RCS file: /cvsroot/mrbayes/mrbayes/Makefile,v -retrieving revision 3.23 -retrieving revision 3.24 -diff -U2 -r3.23 -r3.24 ---- Makefile 22 Dec 2005 16:13:06 -0000 3.23 -+++ Makefile 3 Jan 2006 16:43:13 -0000 3.24 +--- a/Makefile ++++ b/Makefile @@ -50,4 +50,5 @@ ifeq ($(strip $(USEREADLINE)),yes) CFLAGS += -DUSE_READLINE +# CFLAGS += -DCOMPLETIONMATCHES LIBS += -lncurses -lreadline endif -Index: bayes.c -=================================================================== -RCS file: /cvsroot/mrbayes/mrbayes/bayes.c,v -retrieving revision 3.39 -retrieving revision 3.40 -diff -U2 -r3.39 -r3.40 ---- bayes.c 23 Dec 2005 16:26:28 -0000 3.39 -+++ bayes.c 3 Jan 2006 16:43:13 -0000 3.40 +--- a/bayes.c ++++ b/bayes.c @@ -382,9 +382,11 @@ char **readline_completion(const char *text, int start, int stop) { char **matches = (char **) NULL; diff --git a/sci-biology/mrbayes/mrbayes-3.1.2-r2.ebuild b/sci-biology/mrbayes/mrbayes-3.1.2-r2.ebuild index ecc44fe43454..cee9e0f2d286 100644 --- a/sci-biology/mrbayes/mrbayes-3.1.2-r2.ebuild +++ b/sci-biology/mrbayes/mrbayes-3.1.2-r2.ebuild @@ -1,26 +1,29 @@ # Copyright 1999-2021 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 -EAPI=5 +EAPI=8 -inherit epatch toolchain-funcs +inherit toolchain-funcs DESCRIPTION="Bayesian Inference of Phylogeny" HOMEPAGE="http://mrbayes.csit.fsu.edu/" SRC_URI="mirror://sourceforge/${PN}/${P}.tar.gz" -SLOT="0" LICENSE="GPL-2" +SLOT="0" KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris" IUSE="debug mpi readline" DEPEND=" - sys-libs/ncurses:0= + sys-libs/ncurses:= mpi? ( virtual/mpi ) - readline? ( sys-libs/readline:0= )" + readline? ( sys-libs/readline:= ) +" RDEPEND="${DEPEND}" src_prepare() { + default + if use mpi; then sed -e "s:MPI ?= no:MPI=yes:" -i Makefile || die "Patching MPI support." fi @@ -30,7 +33,7 @@ src_prepare() { else # Only needed for OSX with an old (4.x) version of # libreadline, but it doesn't hurt for other distributions. - epatch "${FILESDIR}"/mb_readline_312.patch + eapply "${FILESDIR}"/mb_readline_312.patch fi sed -e 's:-ggdb::g' -i Makefile || die } |