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-rw-r--r--sci-biology/rebase/ChangeLog6
-rw-r--r--sci-biology/rebase/files/digest-rebase-7043
-rw-r--r--sci-biology/rebase/files/digest-rebase-7053
-rw-r--r--sci-biology/rebase/rebase-704.ebuild42
-rw-r--r--sci-biology/rebase/rebase-705.ebuild42
5 files changed, 5 insertions, 91 deletions
diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog
index 173ab2d25638..72d3462e469d 100644
--- a/sci-biology/rebase/ChangeLog
+++ b/sci-biology/rebase/ChangeLog
@@ -1,6 +1,10 @@
# ChangeLog for sci-biology/rebase
# Copyright 2000-2007 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.84 2007/07/18 00:56:28 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.85 2007/07/18 01:03:53 ribosome Exp $
+
+ 18 Jul 2007; Olivier Fisette <ribosome@gentoo.org> -rebase-704.ebuild,
+ -rebase-705.ebuild:
+ Pruned older ebuilds that will never be stabilised.
*rebase-707 (18 Jul 2007)
diff --git a/sci-biology/rebase/files/digest-rebase-704 b/sci-biology/rebase/files/digest-rebase-704
deleted file mode 100644
index 271b80e2bcff..000000000000
--- a/sci-biology/rebase/files/digest-rebase-704
+++ /dev/null
@@ -1,3 +0,0 @@
-MD5 8a0f890d047b84ceda8f6668aff59537 rebase-704.tar.bz2 184563
-RMD160 5aad3fa03f17bf211d6097e795f81610d9045bc3 rebase-704.tar.bz2 184563
-SHA256 8d9792b315f07a62684962b4af79495b8c12397c49769a023d4ba79e17b851dd rebase-704.tar.bz2 184563
diff --git a/sci-biology/rebase/files/digest-rebase-705 b/sci-biology/rebase/files/digest-rebase-705
deleted file mode 100644
index f8542387c512..000000000000
--- a/sci-biology/rebase/files/digest-rebase-705
+++ /dev/null
@@ -1,3 +0,0 @@
-MD5 818000613eb6da27a47c7e6082389d95 rebase-705.tar.bz2 184585
-RMD160 777806e11081ac386ccad841af7b478676549a0c rebase-705.tar.bz2 184585
-SHA256 8cadb7f6825e4bf2375415208b1aa1eafc1b09ec02fb61bb9765a330bbf494fa rebase-705.tar.bz2 184585
diff --git a/sci-biology/rebase/rebase-704.ebuild b/sci-biology/rebase/rebase-704.ebuild
deleted file mode 100644
index b313ec775813..000000000000
--- a/sci-biology/rebase/rebase-704.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2007 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-704.ebuild,v 1.1 2007/04/11 01:15:11 ribosome Exp $
-
-DESCRIPTION="A restriction enzyme database"
-LICENSE="public-domain"
-HOMEPAGE="http://rebase.neb.com"
-SRC_URI="mirror://gentoo/${P}.tar.bz2"
-
-SLOT="0"
-# Minimal build keeps only the indexed files (if applicable) and the
-# documentation. The non-indexed database is not installed.
-IUSE="emboss minimal"
-KEYWORDS="~amd64 ~ppc ~ppc64 ~sparc ~x86"
-
-DEPEND="emboss? ( >=sci-biology/emboss-3.0.0-r1 )"
-
-src_compile() {
- if use emboss; then
- echo; einfo "Indexing Rebase for usage with EMBOSS."
- mkdir REBASE
- EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${PV} \
- -protofile proto.${PV} || die "Indexing Rebase failed."
- echo
- fi
-}
-
-src_install() {
- if ! use minimal; then
- insinto /usr/share/${PN}
- doins withrefm.${PV} proto.${PV} || die \
- "Failed to install raw database."
- fi
- newdoc REBASE.DOC README || die "Failed to install documentation."
- if use emboss; then
- insinto /usr/share/EMBOSS/data/REBASE
- doins REBASE/embossre.{enz,ref,sup} || die \
- "Failed to install EMBOSS data files."
- insinto /usr/share/EMBOSS/data
- doins embossre.equ || die "Failed to install enzyme prototypes file."
- fi
-}
diff --git a/sci-biology/rebase/rebase-705.ebuild b/sci-biology/rebase/rebase-705.ebuild
deleted file mode 100644
index da07bcbba058..000000000000
--- a/sci-biology/rebase/rebase-705.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2007 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-705.ebuild,v 1.1 2007/05/22 00:51:52 ribosome Exp $
-
-DESCRIPTION="A restriction enzyme database"
-LICENSE="public-domain"
-HOMEPAGE="http://rebase.neb.com"
-SRC_URI="mirror://gentoo/${P}.tar.bz2"
-
-SLOT="0"
-# Minimal build keeps only the indexed files (if applicable) and the
-# documentation. The non-indexed database is not installed.
-IUSE="emboss minimal"
-KEYWORDS="~amd64 ~ppc ~ppc64 ~sparc ~x86"
-
-DEPEND="emboss? ( >=sci-biology/emboss-3.0.0-r1 )"
-
-src_compile() {
- if use emboss; then
- echo; einfo "Indexing Rebase for usage with EMBOSS."
- mkdir REBASE
- EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${PV} \
- -protofile proto.${PV} || die "Indexing Rebase failed."
- echo
- fi
-}
-
-src_install() {
- if ! use minimal; then
- insinto /usr/share/${PN}
- doins withrefm.${PV} proto.${PV} || die \
- "Failed to install raw database."
- fi
- newdoc REBASE.DOC README || die "Failed to install documentation."
- if use emboss; then
- insinto /usr/share/EMBOSS/data/REBASE
- doins REBASE/embossre.{enz,ref,sup} || die \
- "Failed to install EMBOSS data files."
- insinto /usr/share/EMBOSS/data
- doins embossre.equ || die "Failed to install enzyme prototypes file."
- fi
-}