diff options
Diffstat (limited to 'sci-chemistry/openbabel-perl')
9 files changed, 0 insertions, 323 deletions
diff --git a/sci-chemistry/openbabel-perl/ChangeLog b/sci-chemistry/openbabel-perl/ChangeLog deleted file mode 100644 index cbbfca8ff..000000000 --- a/sci-chemistry/openbabel-perl/ChangeLog +++ /dev/null @@ -1,51 +0,0 @@ -# ChangeLog for sci-chemistry/openbabel-perl -# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: $ - - 26 Mar 2011; Justin Lecher <jlec@gentoo.org> openbabel-perl-2.3.0.ebuild, - files/openbabel-perl-2.3.0-makefile.patch: - Install into vendor dir - - 25 Mar 2011; Reinis Danne <rei4dan@gmail.com> openbabel-perl-2.3.0.ebuild, - +files/openbabel-perl-2.3.0-makefile.patch: - Fix install in sandbox - -*openbabel-perl-2.3.0 (25 Mar 2011) -*openbabel-perl-2.2.3 (25 Mar 2011) - - 25 Mar 2011; Justin Lecher <jlec@gentoo.org> -openbabel-perl-2.2.1.ebuild, - -openbabel-perl-2.2.2.ebuild, +openbabel-perl-2.2.3.ebuild, - +openbabel-perl-2.3.0.ebuild: - Semi broken perl support for openbael - - 10 Jul 2010; Andreas K. Huettel (dilfridge) <mail@akhuettel.de> - -openbabel-perl-2.2.0.ebuild, openbabel-perl-2.2.1.ebuild, - openbabel-perl-2.2.2.ebuild: - Silence repoman. Drop openbabel-perl-2.2.0 since dependencies cannot be - fulfilled anymore. - -*openbabel-perl-2.2.2 (19 Jul 2009) - - 19 Jul 2009; Reinis Danne <rei4dan@gmail.com> - +openbabel-perl-2.2.2.ebuild, +files/openbabel-perl-2.2.2-makefile.patch: - Version bump to 2.2.2 - -*openbabel-perl-2.2.1 (03 Mar 2009) - - 03 Mar 2009; Reinis Danne <rei4dan@gmail.com> - +files/openbabel-perl-2.2.1-makefile.patch, +openbabel-perl-2.2.1.ebuild: - Version bump to 2.2.1 - - 28 Feb 2009; Reinis Danne <rei4dan@gmail.com> openbabel-perl-2.2.0.ebuild: - Remove untested arches - - 21 Feb 2009; Reinis Danne <rei4dan@gmail.com> openbabel-perl-2.2.0.ebuild: - sci-chemistry/openbabel-perl: Use EAPI=2, fix swig use - -*openbabel-perl-2.2.0 (10 Feb 2009) - - 10 Feb 2009; Reinis Danne <rei4dan@gmail.com> - +files/openbabel-perl-2.2.0-makefile.patch, +metadata.xml, - +openbabel-perl-2.2.0.ebuild: - New package sci-chemistry/openbabel-perl, #212212 - diff --git a/sci-chemistry/openbabel-perl/Manifest b/sci-chemistry/openbabel-perl/Manifest deleted file mode 100644 index ef573ec3a..000000000 --- a/sci-chemistry/openbabel-perl/Manifest +++ /dev/null @@ -1,20 +0,0 @@ ------BEGIN PGP SIGNED MESSAGE----- -Hash: SHA1 - -AUX openbabel-perl-2.2.0-makefile.patch 1151 RMD160 8e46b23009c938f102874242b4539d912bc7f47e SHA1 cb5616215d3199170759c35968243bf0f9c846f5 SHA256 55f1b90d5e388401eecb56a3fdaf6b33a8eb2326a7a329605624ffd08e6ba81d -AUX openbabel-perl-2.2.1-makefile.patch 1151 RMD160 8e46b23009c938f102874242b4539d912bc7f47e SHA1 cb5616215d3199170759c35968243bf0f9c846f5 SHA256 55f1b90d5e388401eecb56a3fdaf6b33a8eb2326a7a329605624ffd08e6ba81d -AUX openbabel-perl-2.2.2-makefile.patch 1151 RMD160 8e46b23009c938f102874242b4539d912bc7f47e SHA1 cb5616215d3199170759c35968243bf0f9c846f5 SHA256 55f1b90d5e388401eecb56a3fdaf6b33a8eb2326a7a329605624ffd08e6ba81d -AUX openbabel-perl-2.3.0-makefile.patch 1765 RMD160 debf4cd445a8d997beb5686c57ce5723e4ed547d SHA1 7947bd8046523bbb87b471308874fd709b0d5b91 SHA256 07e7d4a02fe656ca74ea4bb9e05388010e5a2f1200d7a8ef688b87edf90d1359 -DIST openbabel-2.2.3.tar.gz 6624028 RMD160 4234baf9773aa6f918bb3fa5a25cab5f657f857e SHA1 e396b27551a106e001ca6c953181657a0a53f43f SHA256 eabc8bdbd68431f441b6b40adde0861b2e99750efd21bbb4870ee0a233feae46 -DIST openbabel-2.3.0.tar.gz 14321281 RMD160 96dafa3c2aca544f79e08b5617ab0da845c28a16 SHA1 408a4bddb7f052fd89c57ea51b4204b721856b16 SHA256 6dadcb256d83b1f2e616fa1853dd1afadb23550a20d1c118b406231a09f861fb -EBUILD openbabel-perl-2.2.3.ebuild 1234 RMD160 e3cdc94b23213790ff1ca933ef6f81437395c474 SHA1 f5c9ee17eb29bd708fe963e4316eeee113961d4e SHA256 d856a9d852d49d8762057f8f4e90f165637c8eb909d92b8ac92a17baf88e796d -EBUILD openbabel-perl-2.3.0.ebuild 1107 RMD160 e2c4abc262008b10eb8887ab577dea8879535c16 SHA1 d3d2c3478eef5d2b75c7fdddead158cc744feb8d SHA256 73cdbede3a36149f1006a9c4473ffeeb5323e19e067dbd4f3b6893d29eabcba5 -MISC ChangeLog 1806 RMD160 6e6dc964def48f4259f0a4b398a7fa43d0470ca4 SHA1 c293d1c6328b6ef75acdbda9c5d9669c8e39e4b9 SHA256 2a76a7be281e50a38b3622e7ca2ccd6dad9fcb1fa588bf8e37bc141ff4fbdc44 -MISC metadata.xml 627 RMD160 2eed792ed60ef1e4fe0aba88690f1fc4ff93b3e5 SHA1 d1e9cc0888dfedadb394def1835b272d11d91b38 SHA256 83b3a75fd868e56866941cba2671a75decc1e099e22709b3c6e799767f1e7253 ------BEGIN PGP SIGNATURE----- -Version: GnuPG v2.0.17 (GNU/Linux) - -iEYEARECAAYFAk2N/00ACgkQgAnW8HDreRan/gCfVmhtDVn2GUUOBk9fp8PIEF3w -n8QAni9xxpRV6sqgHpJpgdSWp/UkehXs -=JH7M ------END PGP SIGNATURE----- diff --git a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.2.0-makefile.patch b/sci-chemistry/openbabel-perl/files/openbabel-perl-2.2.0-makefile.patch deleted file mode 100644 index 4c5d4c69b..000000000 --- a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.2.0-makefile.patch +++ /dev/null @@ -1,25 +0,0 @@ ---- Makefile.PL.orig 2009-02-09 15:32:59.000000000 +0200 -+++ Makefile.PL 2009-02-09 15:49:44.000000000 +0200 -@@ -7,16 +7,15 @@ - @ENV{"LD_LIBRARY_PATH"}); - - $CC = 'g++'; --$srcdir = '../../src'; - - # check if we're compiling in the source directory - # check first for the static, then change to dynamic if available --$ldfrom = "\$(OBJECT) $srcdir/.libs/libopenbabel.a -lz" -- if (-r "$srcdir/.libs/libopenbabel.a") and (-s _) and (-B _); --$ldfrom = "\$(OBJECT) -L$srcdir/.libs -lopenbabel -lz" -- if (-r "$srcdir/.libs/libopenbabel.dylib") and (-s _) and (-B _); --$ldfrom = "\$(OBJECT) -L$srcdir/.libs -lopenbabel -lz" -- if (-r "$srcdir/.libs/libopenbabel.so") and (-s _) and (-B _); -+$ldfrom = "\$(OBJECT) /usr/lib/libopenbabel.a -lz" -+ if (-r "/usr/lib/libopenbabel.a") and (-s _) and (-B _); -+$ldfrom = "\$(OBJECT) -L/usr/lib -lopenbabel -lz" -+ if (-r "/usr/lib/libopenbabel.dylib") and (-s _) and (-B _); -+$ldfrom = "\$(OBJECT) -L/usr/lib -lopenbabel -lz" -+ if (-r "/usr/lib/libopenbabel.so") and (-s _) and (-B _); - - # See lib/ExtUtils/MakeMaker.pm for details of how to influence - # the contents of the Makefile that is written. diff --git a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.2.1-makefile.patch b/sci-chemistry/openbabel-perl/files/openbabel-perl-2.2.1-makefile.patch deleted file mode 100644 index 4c5d4c69b..000000000 --- a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.2.1-makefile.patch +++ /dev/null @@ -1,25 +0,0 @@ ---- Makefile.PL.orig 2009-02-09 15:32:59.000000000 +0200 -+++ Makefile.PL 2009-02-09 15:49:44.000000000 +0200 -@@ -7,16 +7,15 @@ - @ENV{"LD_LIBRARY_PATH"}); - - $CC = 'g++'; --$srcdir = '../../src'; - - # check if we're compiling in the source directory - # check first for the static, then change to dynamic if available --$ldfrom = "\$(OBJECT) $srcdir/.libs/libopenbabel.a -lz" -- if (-r "$srcdir/.libs/libopenbabel.a") and (-s _) and (-B _); --$ldfrom = "\$(OBJECT) -L$srcdir/.libs -lopenbabel -lz" -- if (-r "$srcdir/.libs/libopenbabel.dylib") and (-s _) and (-B _); --$ldfrom = "\$(OBJECT) -L$srcdir/.libs -lopenbabel -lz" -- if (-r "$srcdir/.libs/libopenbabel.so") and (-s _) and (-B _); -+$ldfrom = "\$(OBJECT) /usr/lib/libopenbabel.a -lz" -+ if (-r "/usr/lib/libopenbabel.a") and (-s _) and (-B _); -+$ldfrom = "\$(OBJECT) -L/usr/lib -lopenbabel -lz" -+ if (-r "/usr/lib/libopenbabel.dylib") and (-s _) and (-B _); -+$ldfrom = "\$(OBJECT) -L/usr/lib -lopenbabel -lz" -+ if (-r "/usr/lib/libopenbabel.so") and (-s _) and (-B _); - - # See lib/ExtUtils/MakeMaker.pm for details of how to influence - # the contents of the Makefile that is written. diff --git a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.2.2-makefile.patch b/sci-chemistry/openbabel-perl/files/openbabel-perl-2.2.2-makefile.patch deleted file mode 100644 index 4c5d4c69b..000000000 --- a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.2.2-makefile.patch +++ /dev/null @@ -1,25 +0,0 @@ ---- Makefile.PL.orig 2009-02-09 15:32:59.000000000 +0200 -+++ Makefile.PL 2009-02-09 15:49:44.000000000 +0200 -@@ -7,16 +7,15 @@ - @ENV{"LD_LIBRARY_PATH"}); - - $CC = 'g++'; --$srcdir = '../../src'; - - # check if we're compiling in the source directory - # check first for the static, then change to dynamic if available --$ldfrom = "\$(OBJECT) $srcdir/.libs/libopenbabel.a -lz" -- if (-r "$srcdir/.libs/libopenbabel.a") and (-s _) and (-B _); --$ldfrom = "\$(OBJECT) -L$srcdir/.libs -lopenbabel -lz" -- if (-r "$srcdir/.libs/libopenbabel.dylib") and (-s _) and (-B _); --$ldfrom = "\$(OBJECT) -L$srcdir/.libs -lopenbabel -lz" -- if (-r "$srcdir/.libs/libopenbabel.so") and (-s _) and (-B _); -+$ldfrom = "\$(OBJECT) /usr/lib/libopenbabel.a -lz" -+ if (-r "/usr/lib/libopenbabel.a") and (-s _) and (-B _); -+$ldfrom = "\$(OBJECT) -L/usr/lib -lopenbabel -lz" -+ if (-r "/usr/lib/libopenbabel.dylib") and (-s _) and (-B _); -+$ldfrom = "\$(OBJECT) -L/usr/lib -lopenbabel -lz" -+ if (-r "/usr/lib/libopenbabel.so") and (-s _) and (-B _); - - # See lib/ExtUtils/MakeMaker.pm for details of how to influence - # the contents of the Makefile that is written. diff --git a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.0-makefile.patch b/sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.0-makefile.patch deleted file mode 100644 index 034b60907..000000000 --- a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.0-makefile.patch +++ /dev/null @@ -1,28 +0,0 @@ - scripts/CMakeLists.txt | 2 +- - scripts/perl/Makefile.PL | 1 + - 2 files changed, 2 insertions(+), 1 deletions(-) - -diff --git a/scripts/CMakeLists.txt b/scripts/CMakeLists.txt -index bf2527b..3c45111 100644 ---- a/scripts/CMakeLists.txt -+++ b/scripts/CMakeLists.txt -@@ -223,7 +223,7 @@ if (DO_PERL_BINDINGS) - COMMAND ${CMAKE_COMMAND} -E copy ${openbabel_SOURCE_DIR}/scripts/perl/Makefile.PL ${openbabel_BINARY_DIR}/scripts/perl - COMMAND ${CMAKE_COMMAND} -E copy ${openbabel_SOURCE_DIR}/scripts/perl/OpenBabel.pm ${openbabel_BINARY_DIR}/scripts/perl - COMMAND ${CMAKE_COMMAND} -E copy ${openbabel_SOURCE_DIR}/scripts/perl/openbabel-perl.cpp ${openbabel_BINARY_DIR}/scripts/perl -- COMMAND PERL5LIB=${openbabel_SOURCE_DIR}/scripts/perl/inc SRC_DIR=${openbabel_SOURCE_DIR} OBJ_DIR=${openbabel_BINARY_DIR} ${PERL_EXECUTABLE} ${openbabel_BINARY_DIR}/scripts/perl/Makefile.PL ${PERL_PREFIX_TEXT} -+ COMMAND PERL5LIB=${openbabel_SOURCE_DIR}/scripts/perl/inc SRC_DIR=${openbabel_SOURCE_DIR} OBJ_DIR=${openbabel_BINARY_DIR} ${PERL_EXECUTABLE} ${openbabel_BINARY_DIR}/scripts/perl/Makefile.PL INSTALLDIRS=vendor ${PERL_PREFIX_TEXT} - COMMAND PERL5LIB=${openbabel_SOURCE_DIR}/scripts/perl/inc make - DEPENDS ${openbabel_SOURCE_DIR}/scripts/perl/openbabel-perl.cpp - WORKING_DIRECTORY ${openbabel_BINARY_DIR}/scripts/perl -diff --git a/scripts/perl/Makefile.PL b/scripts/perl/Makefile.PL -index a3a2116..44ad27d 100644 ---- a/scripts/perl/Makefile.PL -+++ b/scripts/perl/Makefile.PL -@@ -32,5 +32,6 @@ WriteMakefile( - 'CC' => $CC, - 'LD' => '$(CC)', - 'INC' => '-I../../include -I'.$cmakesrcdir.'/include', -+ 'DESTDIR' => @ENV{"ED"}, - 'OBJECT' => 'openbabel-perl.o' - ); diff --git a/sci-chemistry/openbabel-perl/metadata.xml b/sci-chemistry/openbabel-perl/metadata.xml deleted file mode 100644 index 7dd11d8d7..000000000 --- a/sci-chemistry/openbabel-perl/metadata.xml +++ /dev/null @@ -1,15 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> -<herd>sci-chemistry</herd> -<longdescription> -OpenBabel is a chemical toolbox designed to speak the many languages of -chemical data. It's an open, collaborative project allowing anyone to -search, convert, analyze, or store data from molecular modeling, chemistry, -solid-state materials, biochemistry, or related areas. This package enables -to access OpenBabel library from Python programs. -</longdescription> -<use> -<flag name='swig'>Enable SWIG language binding regeneration</flag> -</use> -</pkgmetadata> diff --git a/sci-chemistry/openbabel-perl/openbabel-perl-2.2.3.ebuild b/sci-chemistry/openbabel-perl/openbabel-perl-2.2.3.ebuild deleted file mode 100644 index 45ada92ac..000000000 --- a/sci-chemistry/openbabel-perl/openbabel-perl-2.2.3.ebuild +++ /dev/null @@ -1,70 +0,0 @@ -# Copyright 1999-2011 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: $ - -inherit eutils perl-module - -DESCRIPTION="Perl bindings for OpenBabel" -HOMEPAGE="http://openbabel.sourceforge.net/" -SRC_URI="mirror://sourceforge/openbabel/openbabel-${PV}.tar.gz" - -KEYWORDS="~amd64" -SLOT="0" -LICENSE="GPL-2" -IUSE="swig" - -RDEPEND=" - dev-lang/perl - ~sci-chemistry/openbabel-${PV}" -DEPEND="${RDEPEND} - swig? ( dev-lang/swig )" - -src_unpack() { - unpack ${A} - S="${WORKDIR}/openbabel-${PV}" - cd "${S}" - - econf \ - $(use_enable swig maintainer-mode) \ - --enable-static \ - || die "econf failed" - S="${S}/scripts" - cd "${S}" - if use swig ; then - emake -W openbabel-perl.i perl/openbabel_perl.cpp \ - || die "Failed to make SWIG perl bindings" - fi - S="${S}/perl" - cd "${S}" - epatch "${FILESDIR}/${P}-makefile.patch" \ - || die "Failed to apply ${P}-makefile.patch" -} - -src_compile() { - perl-module_src_prep - perl-module_src_compile -} - -src_test() { - emake test || die "make test failed" -} - -src_install() { - perl-module_src_install -} - -pkg_preinst() { - perl-module_pkg_preinst -} - -pkg_postinst() { - perl-module_pkg_postinst -} - -pkg_prerm() { - perl-module_pkg_prerm -} - -pkg_postrm() { - perl-module_pkg_postrm -} diff --git a/sci-chemistry/openbabel-perl/openbabel-perl-2.3.0.ebuild b/sci-chemistry/openbabel-perl/openbabel-perl-2.3.0.ebuild deleted file mode 100644 index d3688e13d..000000000 --- a/sci-chemistry/openbabel-perl/openbabel-perl-2.3.0.ebuild +++ /dev/null @@ -1,64 +0,0 @@ -# Copyright 1999-2011 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: $ - -EAPI="3" - -inherit cmake-utils eutils perl-module - -DESCRIPTION="Perl bindings for OpenBabel" -HOMEPAGE="http://openbabel.sourceforge.net/" -SRC_URI="mirror://sourceforge/openbabel/openbabel-${PV}.tar.gz" - -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -SLOT="0" -LICENSE="GPL-2" -IUSE="" - -RDEPEND=" - dev-lang/perl - ~sci-chemistry/openbabel-${PV}" -DEPEND="${RDEPEND}" - -S="${WORKDIR}/openbabel-${PV}" - -src_prepare() { - epatch "${FILESDIR}/${P}-makefile.patch" -} - -src_configure() { - local mycmakeargs="-DPERL_BINDINGS=ON" - cmake-utils_src_configure -} - -src_compile() { - cd "${WORKDIR}/${P}_build/scripts" - perl-module_src_prep - perl-module_src_compile -} - -src_test() { - cd "${WORKDIR}/${P}_build/scripts" - emake test || die "make test failed" -} - -src_install() { - cd "${WORKDIR}/${P}_build/scripts" - perl-module_src_install -} - -pkg_preinst() { - perl-module_pkg_preinst -} - -pkg_postinst() { - perl-module_pkg_postinst -} - -pkg_prerm() { - perl-module_pkg_prerm -} - -pkg_postrm() { - perl-module_pkg_postrm -} |