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-rw-r--r--sci-libs/atlas/Manifest2
-rw-r--r--sci-libs/atlas/atlas-3.9.46.ebuild266
2 files changed, 0 insertions, 268 deletions
diff --git a/sci-libs/atlas/Manifest b/sci-libs/atlas/Manifest
index 4c28aec..eee6c02 100644
--- a/sci-libs/atlas/Manifest
+++ b/sci-libs/atlas/Manifest
@@ -1,8 +1,6 @@
AUX 3.9.39-bfr-overflow.patch 2755 RMD160 4f8204eee5b429e9d3db1c211af80396a575fc87 SHA1 9b59bd8a7bb55e7ed4138731262d17532949ece0 SHA256 19cdab39e50e06de0bdc2a080642388fec3a16c826657621f15fc294268d3438
DIST atlas3.8.4.tar.bz2 2534071 RMD160 fa2828468459213fcf3f1ae4fd26671ba32f4776 SHA1 ef92bcbc4bec096b34ed7a0d29119d84c973df0c SHA256 0f7720fb16fa4b8b8a192ea791e57569546db6f5f016cf3caaee30a9d94583bf
-DIST atlas3.9.46.tar.bz2 5572227 RMD160 1fbe0f403fc8a35b2b355edabc756c65c19befa2 SHA1 aef8b696bc1bc50b304db953e2f20a653b783317 SHA256 a6667438a04e8a640e5cad75addc7678b19ae7f188c1ae7eb41069f84d43cd1a
DIST lapack-3.3.1.tgz 4945204 RMD160 5e9d90122110045e07351f3ab30dc4e2b43d52db SHA1 3ce437e05f0e9a3c8148ec41922f6efeef0ebdac SHA256 56821ab51c29369a34e5085728f92c549a9aa926f26acf7eeac87b61eed329e4
EBUILD atlas-3.8.4.ebuild 7382 RMD160 3d3dca9c817b42e4c8d6ec95f52dc0290340d0eb SHA1 c8ef9142745b320d2f7e2e7da35b25d00ec83d6b SHA256 2516f3ed8a750904fecf0a58ec9e91f63ec98bdb19a17f923908d935fe908720
-EBUILD atlas-3.9.46.ebuild 7335 RMD160 d3a23ef050d15f347c821b2da3f58ad52590ca05 SHA1 ce1413ffb59fe852bafdc7869d9ddf62d2f491fc SHA256 aad7a93c3664722ea4c0de27f0ff868ea0b3f51c5c5e087959531fe06ddd88db
MISC ChangeLog 1870 RMD160 9cf8d9bb466fef4e2a299fdbc3e0733bf79d9bfa SHA1 a9a8f2f12b153dc3faaef2563d5751306bcab441 SHA256 54a249ef95c2e0f7b987dd17fc9f2038e0baa36551566131d9197c60a9b98cc0
MISC metadata.xml 726 RMD160 e43f5ea9c594bbe2174f6640bbfdccd8b17d4a68 SHA1 0ab8c05e7925b4716d8c94acd952bf3ab85165cb SHA256 27ef4eee7e645ad923644830d057db45d32342ad250ad903ff10915a9ca068fd
diff --git a/sci-libs/atlas/atlas-3.9.46.ebuild b/sci-libs/atlas/atlas-3.9.46.ebuild
deleted file mode 100644
index 1c988ac..0000000
--- a/sci-libs/atlas/atlas-3.9.46.ebuild
+++ /dev/null
@@ -1,266 +0,0 @@
-# Copyright 1999-2011 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-EAPI=4
-inherit eutils toolchain-funcs versionator alternatives-2
-
-LAPACKP=lapack-3.3.1
-
-DESCRIPTION="Automatically Tuned Linear Algebra Software"
-HOMEPAGE="http://math-atlas.sourceforge.net/"
-SRC_URI="mirror://sourceforge/math-atlas/${PN}${PV}.tar.bz2
- fortran? ( lapack? ( http://www.netlib.org/lapack/${LAPACKP}.tgz ) )"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 "
-IUSE="fortran doc lapack static-libs threads"
-
-RDEPEND="fortran? ( virtual/fortran )"
-DEPEND="${RDEPEND}
- !prefix? ( sys-power/cpufrequtils )"
-
-S="${WORKDIR}/ATLAS"
-
-atlas_configure() {
- local mycc="$(tc-getCC)"
- # http://sourceforge.net/tracker/?func=detail&aid=3301697&group_id=23725&atid=379483
- [[ ${mycc} == *gcc* ]] && mycc=gcc
- local myconf=(
- "--prefix=${ED}/usr"
- "--libdir=${ED}/usr/$(get_libdir)"
- "--incdir=${ED}/usr/include"
- "--cc=${mycc}"
- "-C ac ${mycc}"
- "-D c -DWALL"
- "-F ac '${CFLAGS}'"
- "-Ss pmake '\$(MAKE) ${MAKEOPTS}'"
- )
-
- # OpenMP shown to decreased performance over POSIX threads
- # (at least in 3.9.39, see atlas-dev mailing list)
- if use threads; then
- myconf+=( "-t -1" "-Si omp 0" )
- else
- myconf+=( "-t 0" "-Si omp 0" )
- fi
-
- if use amd64 || use ppc64 || use sparc; then
- if [ ${ABI} = amd64 ] || [ ${ABI} = ppc64 ] || [ ${ABI} = sparc64 ] ; then
- myconf+=( "-b 64" )
- elif [ ${ABI} = x86 ] || [ ${ABI} = ppc ] || [ ${ABI} = sparc32 ] ; then
- myconf+=( "-b 32" )
- else
- myconf+=( "-b 64" )
- fi
- elif use ppc || use x86; then
- myconf+=( "-b 32" )
- elif use ia64; then
- myconf+=( "-b 64" )
- else #hppa alpha ...
- myconf+=( "" )
- fi
- if use fortran; then
- myconf+=(
- "-C if $(tc-getFC)"
- "-F if '${FFLAGS}'"
- )
- if use lapack; then
- myconf+=(
- "-Si latune 1"
- "--with-netlib-lapack-tarfile=${DISTDIR}/${LAPACKP}.tgz"
- )
- else
- myconf+=( "-Si latune 0" )
- fi
- else
- myconf+=( "-Si latune 0" "--nof77" )
- fi
- local confdir="${S}_${1}"; shift
- myconf+=( $@ )
- mkdir "${confdir}" && cd "${confdir}"
- "${S}"/configure ${myconf[@]} || die "configure in ${confdir} failed"
-}
-
-atlas_compile() {
- pushd "${S}_${1}" > /dev/null
- # atlas does its own parallel builds
- emake -j1 build
- cd lib
- emake libclapack.a
- [[ -e libptcblas.a ]] && emake libptclapack.a
- popd > /dev/null
-}
-
-# transform a static archive into a shared library and install them
-# atlas_install_libs <mylib.a> [extra link flags]
-atlas_install_libs() {
- local libname=$(basename ${1%.*})
- einfo "Installing ${libname}"
- local soname=${libname}.so.$(get_major_version)
- shift
- pushd "${S}_shared"/lib > /dev/null
- ${LINK:-$(tc-getCC)} ${LDFLAGS} -shared -Wl,-soname=${soname} \
- -Wl,--whole-archive ${libname}.a -Wl,--no-whole-archive \
- "$@" -o ${soname} || die "Creating ${soname} failed"
- dolib.so ${soname}
- ln -s ${soname} ${soname%.*}
- dosym ${soname} /usr/$(get_libdir)/${soname%.*}
- popd > /dev/null
- use static-libs && dolib.a "${S}_static"/lib/${libname}.a
-}
-
-# create and install a pkgconfig file
-# atlas_install_pc <libname> <pkg name> [extra link flags]
-atlas_install_pc() {
- local libname=${1} ; shift
- local pcname=${1} ; shift
- cat <<-EOF > ${pcname}.pc
- prefix=${EPREFIX}/usr
- libdir=\${prefix}/$(get_libdir)
- includedir=\${prefix}/include
- Name: ${pcname}
- Description: ${PN} ${pcname}
- Version: ${PV}
- URL: ${HOMEPAGE}
- Libs: -L\${libdir} -l${libname} $@
- Cflags: -I\${includedir}/${PN}
- ${PCREQ}
- EOF
- insinto /usr/$(get_libdir)/pkgconfig
- doins ${pcname}.pc
-}
-
-pkg_setup() {
- if [[ -n $(type -P cpufreq-info) ]]; then
- [[ -z $(cpufreq-info -d) ]] && return
- local ncpu=$(LANG=C cpufreq-info | grep -c "analyzing CPU")
- local cpu=0
- while [[ ${cpu} -lt ${ncpu} ]]; do
- if ! $(LANG=C cpufreq-info -p -c ${cpu} | grep -q performance); then
- ewarn "CPU $cpu is not set to performance"
- ewarn "Run cpufreq-set -r -g performance as root"
- fi
- cpu=$(( cpu + 1 ))
- done
- else
- ewarn "Please make sure to disable CPU throttling completely"
- ewarn "during the compile of ${PN}. Otherwise, all ${PN}"
- ewarn "generated timings will be completely random and the"
- ewarn "performance of the resulting libraries will be degraded"
- ewarn "considerably."
- fi
-}
-
-src_prepare() {
- epatch "${FILESDIR}"/3.9.39-bfr-overflow.patch
-}
-
-src_configure() {
- atlas_configure shared "-Fa alg -fPIC"
- use static-libs && atlas_configure static
-}
-
-src_compile() {
- atlas_compile shared
- use static-libs && atlas_compile static
-}
-
-src_test() {
- cd "${S}_shared"
- emake -j1 check
- emake -j1 time
-}
-
-src_install() {
- cd "${S}_shared/lib"
- # rename to avoid collision with other packages
- local l
- for l in {,c}{blas,lapack}; do
- if [[ -e lib${l}.a ]]; then
- mv lib{,atl}${l}.a
- use static-libs && mv "${S}"_static/lib/lib{,atl}${l}.a
- fi
- done
-
- [[ -e libptcblas.a ]] && PTLIBS="-lpthread"
-
- # atlas
- atlas_install_libs libatlas.a -lm ${PTLIBS}
-
- # cblas
- atlas_install_libs libatlcblas.a -lm -L. -latlas
- atlas_install_pc atlcblas atlas-cblas -lm -latlas
- alternatives_for cblas atlas 0 \
- /usr/$(get_libdir)/pkgconfig/cblas.pc atlas-cblas.pc \
- /usr/include/cblas.h atlas/cblas.h
-
- # cblas threaded
- if [[ -e libptcblas.a ]]; then
- atlas_install_libs libptcblas.a -lm -L. -latlas ${PTLIBS}
- atlas_install_pc ptcblas atlas-cblas-threads -lm -latlas ${PTLIBS}
- alternatives_for cblas atlas-threads 0 \
- /usr/$(get_libdir)/pkgconfig/cblas.pc atlas-cblas-threads.pc \
- /usr/include/cblas.h atlas/cblas.h
- fi
-
- if use lapack; then
- PCREQ="Requires: cblas"
- # clapack
- atlas_install_libs libatlclapack.a -lm -L. -latlas -latlcblas
- atlas_install_pc atlclapack atlas-clapack -lm -latlas
-
- # clapack threaded
- if [[ -e libptclapack.a ]]; then
- atlas_install_libs libptclapack.a -lm -L. -latlas -lptcblas ${PTLIBS}
- atlas_install_pc ptclapack atlas-clapack-threads -lm -latlas ${PTLIBS}
- fi
- fi
-
- if use fortran; then
- LINK=$(tc-getF77) PCREQ=
- # blas
- atlas_install_libs libf77blas.a -lm -L. -latlas
- atlas_install_pc f77blas atlas-blas -lm -latlas
- alternatives_for blas atlas 0 \
- /usr/$(get_libdir)/pkgconfig/blas.pc atlas-blas.pc
-
- # blas threaded
- if [[ -e libptf77blas.a ]]; then
- atlas_install_libs libptf77blas.a -lm -L. -latlas ${PTLIBS}
- atlas_install_pc ptf77blas atlas-blas-threads -lm -latlas ${PTLIBS}
- alternatives_for blas atlas-threads 0 \
- /usr/$(get_libdir)/pkgconfig/blas.pc atlas-blas-threads.pc
- fi
-
- if use lapack; then
- PCREQ="Requires: blas cblas"
- # lapack
- atlas_install_libs libatllapack.a \
- -lm -L. -latlas -latlcblas -lf77blas
- atlas_install_pc atllapack atlas-lapack -lm -latlas
- alternatives_for lapack atlas 0 \
- /usr/$(get_libdir)/pkgconfig/lapack.pc atlas-lapack.pc
- # lapack threaded
- if [[ -e libptlapack.a ]]; then
- atlas_install_libs libptlapack.a \
- -lm -L. -latlas -lptcblas -lptf77blas ${PTLIBS}
- atlas_install_pc ptlapack atlas-lapack-threads \
- -lm -latlas ${PTLIBS}
- alternatives_for lapack atlas-threads 0 \
- /usr/$(get_libdir)/pkgconfig/lapack.pc atlas-lapack-threads.pc
- fi
- fi
- fi
-
- cd "${S}"
- insinto /usr/include/${PN}
- doins include/*.h
-
- cd "${S}/doc"
- dodoc INDEX.txt AtlasCredits.txt ChangeLog
- use doc && dodoc atlas*pdf cblas.pdf cblasqref.pdf
- use doc && use fortran && dodoc f77blas*pdf
- use doc && use fortran && use lapack && dodoc lapack*pdf
-}