summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
Diffstat (limited to 'sci-biology/readseq')
-rw-r--r--sci-biology/readseq/ChangeLog7
-rw-r--r--sci-biology/readseq/readseq-20100513.ebuild38
2 files changed, 44 insertions, 1 deletions
diff --git a/sci-biology/readseq/ChangeLog b/sci-biology/readseq/ChangeLog
index bb09b77767d3..87657dba222e 100644
--- a/sci-biology/readseq/ChangeLog
+++ b/sci-biology/readseq/ChangeLog
@@ -1,6 +1,11 @@
# ChangeLog for sci-biology/readseq
# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/readseq/ChangeLog,v 1.11 2014/02/08 10:03:50 ercpe Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/readseq/ChangeLog,v 1.12 2014/02/08 14:42:29 ercpe Exp $
+
+*readseq-20100513 (08 Feb 2014)
+
+ 08 Feb 2014; Johann Schmitz <ercpe@gentoo.org> +readseq-20100513.ebuild:
+ Version bump of sci-biology/readseq
*readseq-20080420-r1 (08 Feb 2014)
diff --git a/sci-biology/readseq/readseq-20100513.ebuild b/sci-biology/readseq/readseq-20100513.ebuild
new file mode 100644
index 000000000000..8e8a55e8315c
--- /dev/null
+++ b/sci-biology/readseq/readseq-20100513.ebuild
@@ -0,0 +1,38 @@
+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/readseq/readseq-20100513.ebuild,v 1.1 2014/02/08 14:42:29 ercpe Exp $
+
+EAPI=5
+
+inherit java-pkg-2 java-ant-2
+
+DESCRIPTION="Reads and writes nucleic/protein sequences in various formats."
+HOMEPAGE="http://iubio.bio.indiana.edu/soft/molbio/readseq/"
+SRC_URI="http://dev.gentoo.org/~ercpe/distfiles/${CATEGORY}/${PN}/${P}.zip"
+
+LICENSE="public-domain"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE=""
+
+RDEPEND="!=sci-biology/meme-4.8.1
+ >=virtual/jre-1.4"
+DEPEND=">=virtual/jdk-1.4
+ app-arch/unzip"
+
+S=${WORKDIR}
+
+java_prepare() {
+ rm "${S}"/lib/* || die
+ epatch "${FILESDIR}"/20080420-*
+}
+
+src_install() {
+ java-pkg_dojar build/readseq.jar
+ java-pkg_dolauncher
+}
+
+pkg_postinst() {
+ elog "Documentation is available at"
+ elog "http://iubio.bio.indiana.edu/soft/molbio/readseq/java/Readseq2-help.html"
+}