diff options
| author |   Olivier Fisette <ribosome@gentoo.org> | 2005-08-14 23:52:27 +0000 |
|---|---|---|
| committer | Olivier Fisette <ribosome@gentoo.org> | 2005-08-14 23:52:27 +0000 |
| commit | 798254471a5940da31d69077f869c6991b4d7950 (patch) | |
| tree | 86fcf5aeb27abc2e1c59fc6ee79873c781df863b /sci-biology | |
| parent | Autodiscover fonts instead of specifying them. (diff) | |
| download | gentoo-2-798254471a5940da31d69077f869c6991b4d7950.tar.gz gentoo-2-798254471a5940da31d69077f869c6991b4d7950.tar.bz2 gentoo-2-798254471a5940da31d69077f869c6991b4d7950.zip | |
New version. Added MPI support.New version. Added MPI support.
(Portage version: 2.0.51.22-r2)
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/mrbayes/ChangeLog | 8 | ||||
| -rw-r--r-- | sci-biology/mrbayes/Manifest | 2 | ||||
| -rw-r--r-- | sci-biology/mrbayes/files/digest-mrbayes-3.1.1 | 1 | ||||
| -rw-r--r-- | sci-biology/mrbayes/metadata.xml | 3 | ||||
| -rw-r--r-- | sci-biology/mrbayes/mrbayes-3.1.1.ebuild | 36 |
5 files changed, 48 insertions, 2 deletions
diff --git a/sci-biology/mrbayes/ChangeLog b/sci-biology/mrbayes/ChangeLog index 03fdb7a39c75..d4083d306e02 100644 --- a/sci-biology/mrbayes/ChangeLog +++ b/sci-biology/mrbayes/ChangeLog @@ -1,6 +1,12 @@ # ChangeLog for sci-biology/mrbayes # Copyright 1999-2005 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/mrbayes/ChangeLog,v 1.5 2005/02/20 05:47:16 j4rg0n Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/mrbayes/ChangeLog,v 1.6 2005/08/14 23:52:27 ribosome Exp $ + +*mrbayes-3.1.1 (14 Aug 2005) + + 14 Aug 2005; Olivier Fisette <ribosome@gentoo.org> metadata.xml, + +mrbayes-3.1.1.ebuild: + New version. Added MPI support. 20 Feb 2005; Lina Pezzella <j4rg0n@gentoo.org> mrbayes-3.0.ebuild: Stable x86 and ppc-macos diff --git a/sci-biology/mrbayes/Manifest b/sci-biology/mrbayes/Manifest index 6a64efc22d2c..f0a1e5d217e4 100644 --- a/sci-biology/mrbayes/Manifest +++ b/sci-biology/mrbayes/Manifest @@ -1,4 +1,6 @@ +MD5 ab5a31b649dda8a116b56dceecc4ddf8 mrbayes-3.1.1.ebuild 808 MD5 9773f314706a104346cc218baa643323 ChangeLog 821 MD5 e0542c9d79cfbdd0eae93f879da46a13 metadata.xml 784 MD5 40c31f13a4018ec0868a0be3b1154056 mrbayes-3.0.ebuild 1049 MD5 fa11d965ac0a1c1230c1e4628a2765d0 files/digest-mrbayes-3.0 66 +MD5 633f96bc05400c5b178fdc58853587b5 files/digest-mrbayes-3.1.1 69 diff --git a/sci-biology/mrbayes/files/digest-mrbayes-3.1.1 b/sci-biology/mrbayes/files/digest-mrbayes-3.1.1 new file mode 100644 index 000000000000..14c831e97799 --- /dev/null +++ b/sci-biology/mrbayes/files/digest-mrbayes-3.1.1 @@ -0,0 +1 @@ +MD5 bb4992eab3402c8c6c28d0db6c25a6ae mrbayes-3.1.1_src.tar.gz 429222 diff --git a/sci-biology/mrbayes/metadata.xml b/sci-biology/mrbayes/metadata.xml index 51c1d41865d9..e9a4eb84428c 100644 --- a/sci-biology/mrbayes/metadata.xml +++ b/sci-biology/mrbayes/metadata.xml @@ -3,7 +3,8 @@ <pkgmetadata> <herd>sci</herd> <maintainer> - <email>j4rg0n@gentoo.org</email> + <email>ribosome@gentoo.org</email> + <name>Olivier Fisette</name> </maintainer> <longdescription> MrBayes is a program for the Bayesian estimation of phylogeny. diff --git a/sci-biology/mrbayes/mrbayes-3.1.1.ebuild b/sci-biology/mrbayes/mrbayes-3.1.1.ebuild new file mode 100644 index 000000000000..d2e6ea6df9b7 --- /dev/null +++ b/sci-biology/mrbayes/mrbayes-3.1.1.ebuild @@ -0,0 +1,36 @@ +# Copyright 1999-2005 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/mrbayes/mrbayes-3.1.1.ebuild,v 1.1 2005/08/14 23:52:27 ribosome Exp $ + +inherit eutils toolchain-funcs + +DESCRIPTION="Bayesian Inference of Phylogeny" +HOMEPAGE="http://mrbayes.csit.fsu.edu/" +SRC_URI="mirror://sourceforge/${PN}/${P}_src.tar.gz" + +LICENSE="GPL-2" +SLOT="0" +KEYWORDS="~x86 ~ppc-macos" +IUSE="mpi" + +DEPEND="mpi? ( virtual/mpi )" + +src_unpack() { + unpack ${A} + cd "${S}" + sed -e "s:OPTFLAGS ?= -O3:OPTFLAGS = ${CFLAGS}:" \ + -e "s:CC = gcc:CC = $(tc-getCC):" \ + -i Makefile || die + if use mpi; then + sed -e "s:MPI ?= no:MPI=yes:" -i Makefile || die + fi +} + +src_compile() { + emake || die "emake failed" +} + +src_install() { + dobin mb + dodoc readme.txt +} |